RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 FBXW10Q5XX13 1052 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 RASGRP2Q7LDG7 609 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 PIGSQ96S52 555 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 PSTPIP2Q9H939 334 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 CDK8P49336 464 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 BIRC3Q13489 604 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
SFXN1-201ENST00000321442 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-201ENST00000321442 CEP83Q9Y592 693 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 LRRC53A6NM62 1247 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 PALMO75781 387 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 GPR162Q16538 588 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 FAM133BQ5BKY9 247 aaKnown RBP17.92■□□□□ 0.46
SFXN1-201ENST00000321442 SLFN13Q68D06 897 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 USP37Q86T82 979 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 SPATA4Q8NEY3 305 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 STAG1Q8WVM7 1258 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 MAGOHBQ96A72 148 aaKnown RBP17.92■□□□□ 0.46
SFXN1-201ENST00000321442 MASTLQ96GX5 879 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 ARHGEF10LQ9HCE6 1279 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 HOMER3Q9NSC5 361 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 ZNF446Q9NWS9 450 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 DDX25Q9UHL0 483 aaKnown RBP17.92■□□□□ 0.46
SFXN1-201ENST00000321442 H3BQF6 201 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 GNA14O95837 355 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 HARSP12081 509 aaKnown RBP17.92■□□□□ 0.46
SFXN1-201ENST00000321442 TBC1D10BQ4KMP7 808 aaPredicted RBP17.92■□□□□ 0.46
SFXN1-201ENST00000321442 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 PLAAQ9Y263 795 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 STK36Q9NRP7 1315 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 CLIC2O15247 247 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 GUCY1A3Q02108 690 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 OSBPL9Q96SU4 736 aa17.92■□□□□ 0.46
SFXN1-201ENST00000321442 ARHGEF35A5YM69 484 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 PGRMC1O00264 195 aaKnown RBP17.91■□□□□ 0.46
SFXN1-201ENST00000321442 ATP5DP30049 168 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 PPP4R3AQ6IN85 833 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 CCDC197Q8NCU1 140 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 PICK1Q9NRD5 415 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.91■□□□□ 0.46
SFXN1-201ENST00000321442 COL4A3BPQ9Y5P4 624 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 LRRN2O75325 713 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 DAAM1Q9Y4D1 1078 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 PCDHA1Q9Y5I3 950 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 CAMTA1Q9Y6Y1 1673 aa17.91■□□□□ 0.46
SFXN1-201ENST00000321442 ALAS1P13196 640 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 DESP17661 470 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 MESDQ14696 234 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 ABCB5Q2M3G0 1257 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 ARL6IP4Q66PJ3 421 aaKnown RBP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 SMC6Q96SB8 1091 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 CUEDC2Q9H467 287 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 RFX7Q2KHR2 1363 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 MEIS1O00470 390 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 IFNB1P01574 187 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 FCER1AP12319 257 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 BEND6Q5SZJ8 279 aaPredicted RBP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 PLCB1Q9NQ66 1216 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 UTYO14607 1347 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 SASH3O75995 380 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 R3HDM1Q15032 1099 aaKnown RBP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 FOXP4Q8IVH2 680 aaPredicted RBP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 PPFIBP2Q8ND30 876 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 KRT14P02533 472 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 ALKBH5Q6P6C2 394 aaKnown RBP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 DDX12PQ92771 950 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 STMN2Q93045 179 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
SFXN1-201ENST00000321442 AK8Q96MA6 479 aa17.9■□□□□ 0.46
SFXN1-201ENST00000321442 ANO9A1A5B4 782 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 GFPT2O94808 682 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 CASP7P55210 303 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 GALNT17Q6IS24 598 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 TRIM65Q6PJ69 517 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 N4BP2L2Q92802 583 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-201ENST00000321442 EPB41L4AQ9HCS5 686 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-201ENST00000321442 KLHL14Q9P2G3 628 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 POTEMA6NI47 508 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 BCRP11274 1271 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 PTPAQ15257 358 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 KIF13AQ9H1H9 1805 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 SF3B3Q15393 1217 aaKnown RBP17.89■□□□□ 0.45
SFXN1-201ENST00000321442 UBE2SQ16763 222 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 HHATQ5VTY9 493 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 PLA2G12BQ9BX93 195 aa17.89■□□□□ 0.45
SFXN1-201ENST00000321442 DDX47Q9H0S4 455 aaKnown RBP17.89■□□□□ 0.45
SFXN1-201ENST00000321442 SESN3P58005 492 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 TBC1D1Q86TI0 1168 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-201ENST00000321442 PROCA1Q8NCQ7 364 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-201ENST00000321442 MS4A14Q96JA4 679 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 PAGR1Q9BTK6 254 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 GINS2Q9Y248 185 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 WDR19Q8NEZ3 1342 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms