RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 ZWINTO95229 277 aa13□□□□□ -0.33
AMBRA1-201ENST00000314845 ZBED6P86452 979 aa13□□□□□ -0.33
AMBRA1-201ENST00000314845 APBA1Q02410 837 aa13□□□□□ -0.33
AMBRA1-201ENST00000314845 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
AMBRA1-201ENST00000314845 SLFN12LQ6IEE8 588 aa13□□□□□ -0.33
AMBRA1-201ENST00000314845 EP400NLQ6ZTU2 488 aa13□□□□□ -0.33
AMBRA1-201ENST00000314845 PCIF1Q9H4Z3 704 aa13□□□□□ -0.33
AMBRA1-201ENST00000314845 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 ZBTB5O15062 677 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 PRPSAP1Q14558 356 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 Q3C1V9 767 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 KAZNQ674X7 775 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 EPSTI1Q96J88 318 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 ISCA1Q9BUE6 129 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 COX16Q9P0S2 106 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 KDM6BO15054 1643 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 JAK3P52333 1124 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 KIAA1841Q6NSI8 718 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 CCDC13Q8IYE1 715 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 FTOQ9C0B1 505 aaKnown RBP eCLIP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 HOXA13P31271 388 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 AIFM3Q96NN9 605 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 TMEM47Q9BQJ4 181 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 VCXQ9H320 206 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 CACYBPQ9HB71 228 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 GCNT4Q9P109 453 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 NXF1Q9UBU9 619 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 LRRN2O75325 713 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 MGARPQ8TDB4 240 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 TDRD3Q9H7E2 651 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 LRRC4Q9HBW1 653 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 SLC12A6Q9UHW9 1150 aa12.99□□□□□ -0.33
AMBRA1-201ENST00000314845 ADCY10Q96PN6 1610 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 HSPA6P17066 643 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 GARSP41250 739 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 PSMD6Q15008 389 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 FAM167AQ96KS9 214 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 MAD1L1Q9Y6D9 718 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 UTYO14607 1347 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 GOLGA8KD6RF30 607 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 ALX1Q15699 326 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 TBC1D10BQ4KMP7 808 aaPredicted RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 C10orf76Q5T2E6 689 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 NAA35Q5VZE5 725 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 DNAJC24Q6P3W2 148 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 NUF2Q9BZD4 464 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 KLHL14Q9P2G3 628 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 RNF14Q9UBS8 474 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 STK36Q9NRP7 1315 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 CACNB3P54284 484 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 MCPH1Q8NEM0 835 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 TCP11Q8WWU5 503 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 PRKAG2Q9UGJ0 569 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 SRGAP2BP0DMP2 458 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 ARMCX2Q7L311 632 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 PAGE5Q96GU1 130 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 JRKLQ9Y4A0 524 aa12.98□□□□□ -0.33
AMBRA1-201ENST00000314845 CHD1O14646 1710 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 ECE2O60344 883 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 LARGE1O95461 756 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 ARL4AP40617 200 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 GIMAP8Q8ND71 665 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 RABGGTAQ92696 567 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 SLC38A10Q9HBR0 1119 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 FEM1BQ9UK73 627 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 COBLO75128 1261 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 LDHAP00338 332 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 GUCY2DQ02846 1103 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 RBL2Q08999 1139 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 C11orf57Q6ZUT1 292 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 SLC35F6Q8N357 371 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 RABEP2Q9H5N1 569 aa12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-201ENST00000314845 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms