RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PPP6R2O75170 966 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 ABL1P00519 1130 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 SCG2P13521 617 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 ARHGAP18Q8N392 663 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 DEPDC1BQ8WUY9 529 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 ADCY9O60503 1353 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 ARHGAP10A1A4S6 786 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 GMNCA6NCL1 334 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 GFPT2O94808 682 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 HSPA8P11142 646 aaKnown RBP16.02■□□□□ 0.15
SCN3B-201ENST00000299333 XKR9Q5GH70 373 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 C10orf76Q5T2E6 689 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 TTC1Q99614 292 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 CCDC90BQ9GZT6 254 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 PCDHB4Q9Y5E5 795 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 FRMPD2Q68DX3 1309 aaPredicted RBP16.02■□□□□ 0.15
SCN3B-201ENST00000299333 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
SCN3B-201ENST00000299333 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.15
SCN3B-201ENST00000299333 STAT2P52630 851 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 DARS2Q6PI48 645 aaKnown RBP16.02■□□□□ 0.15
SCN3B-201ENST00000299333 NLRX1Q86UT6 975 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 MIS12Q9H081 205 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 DISC1Q9NRI5 854 aa16.02■□□□□ 0.15
SCN3B-201ENST00000299333 PYGBP11216 843 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 TMPRSS15P98073 1019 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 NLRP14Q86W24 1093 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 DHTKD1Q96HY7 919 aaPredicted RBP16.01■□□□□ 0.15
SCN3B-201ENST00000299333 PANX2Q96RD6 677 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 SNX5Q9Y5X3 404 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 IQANK1A0A1B0GTG1 560 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 GOLGA8CPA6NN73 597 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 TPD52L2O43399 206 aaKnown RBP16.01■□□□□ 0.15
SCN3B-201ENST00000299333 SORBS3O60504 671 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 MAGOHP61326 146 aaKnown RBP16.01■□□□□ 0.15
SCN3B-201ENST00000299333 NAA30Q147X3 362 aaPredicted RBP16.01■□□□□ 0.15
SCN3B-201ENST00000299333 MAN2A1Q16706 1144 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
SCN3B-201ENST00000299333 CCNYQ8ND76 341 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 MLXIPLQ9NP71 852 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 SUPT3HO75486 399 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 SLFN12Q8IYM2 578 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 STRIP2Q9ULQ0 834 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
SCN3B-201ENST00000299333 HSPA6P17066 643 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 NT5C1BQ96P26 610 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 AP2B1P63010 937 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 AOC3Q16853 763 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 METTL13Q8N6R0 699 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 GIPC2Q8TF65 315 aa16.01■□□□□ 0.15
SCN3B-201ENST00000299333 ERBB4Q15303 1308 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 PDE8AO60658 829 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 TMEM191BP0C7N4 346 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 SPDYE6P0CI01 402 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 GOLGA8HP0CJ92 632 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 EPHB1P54762 984 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 RNF169Q8NCN4 708 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 PYROXD1Q8WU10 500 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 DCAF5Q96JK2 942 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
SCN3B-201ENST00000299333 PICK1Q9NRD5 415 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 CHCHD3Q9NX63 227 aaKnown RBP16■□□□□ 0.15
SCN3B-201ENST00000299333 ZBED4O75132 1171 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 HSPA4LO95757 839 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 KITP10721 976 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 CYP4A11Q02928 519 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 GLE1Q53GS7 698 aaKnown RBP16■□□□□ 0.15
SCN3B-201ENST00000299333 ZNF658Q5TYW1 1059 aaPredicted RBP16■□□□□ 0.15
SCN3B-201ENST00000299333 SLC30A9Q6PML9 568 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 FAM161BQ96MY7 647 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 ETNK1Q9HBU6 452 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 INPP5FQ9Y2H2 1132 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 ZBED6P86452 979 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 TCP10Q12799 353 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 GLG1Q92896 1179 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 ZNF229Q9UJW7 825 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 TNKSO95271 1327 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 SRGAP2BP0DMP2 458 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 RFX8Q6ZV50 586 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
SCN3B-201ENST00000299333 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
SCN3B-201ENST00000299333 TESPA1A2RU30 521 aaPredicted RBP15.99■□□□□ 0.15
SCN3B-201ENST00000299333 DAB1O75553 588 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 BPIFB4P59827 614 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 KIF19Q2TAC6 998 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 TRIM11Q96F44 468 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 COQ7Q99807 217 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 NDE1Q9NXR1 346 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
SCN3B-201ENST00000299333 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms