RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 LIN7AO14910 233 aaPredicted RBP14.41□□□□□ -0.1
NUP54-201ENST00000264883 AHCYL1O43865 530 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 FGRP09769 529 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 CALML3P27482 149 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 NT5C2P49902 561 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 BIRC3Q13489 604 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 EARS2Q5JPH6 523 aaKnown RBP14.41□□□□□ -0.1
NUP54-201ENST00000264883 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
NUP54-201ENST00000264883 SHISA4Q96DD7 197 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 NDST4Q9H3R1 872 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 MAGEF1Q9HAY2 307 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 V9GY48 417 aaPredicted RBP14.41□□□□□ -0.1
NUP54-201ENST00000264883 ORC4O43929 436 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 DIAPH2O60879 1101 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 CAND2O75155 1236 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 FESP07332 822 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 GSTA1P08263 222 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 DRD4P21917 467 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 PDCD2Q16342 344 aaPredicted RBP14.41□□□□□ -0.1
NUP54-201ENST00000264883 RUFY4Q6ZNE9 571 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 AMIGO3Q86WK7 504 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 FAM114A1Q8IWE2 563 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 CCDC155Q8N6L0 562 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 AGAP11Q8TF27 550 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 BORCS6Q96GS4 357 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 BRIP1Q9BX63 1249 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 LRP2BPQ9P2M1 347 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 NARFQ9UHQ1 456 aa14.41□□□□□ -0.1
NUP54-201ENST00000264883 NIP7Q9Y221 180 aaKnown RBP eCLIP14.41□□□□□ -0.1
NUP54-201ENST00000264883 TRIM49BA6NDI0 452 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 B4DLN1 442 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 PSMA7O14818 248 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 SRGNP10124 158 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 PRCPP42785 496 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 NPY5RQ15761 445 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 SLC5A9Q2M3M2 681 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 ZC3H12AQ5D1E8 599 aaKnown RBP14.4□□□□□ -0.1
NUP54-201ENST00000264883 FIGNQ5HY92 759 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 SLC30A9Q6PML9 568 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 TBC1D1Q86TI0 1168 aaPredicted RBP14.4□□□□□ -0.1
NUP54-201ENST00000264883 CCDC197Q8NCU1 140 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 OR2W6PQ8NHA6 318 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 PCMTD1Q96MG8 357 aaPredicted RBP14.4□□□□□ -0.1
NUP54-201ENST00000264883 LRRC4BQ9NT99 713 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 CNOT8Q9UFF9 292 aaKnown RBP14.4□□□□□ -0.1
NUP54-201ENST00000264883 MYH10P35580 1976 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 CNTNAP5Q8WYK1 1306 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 A0A1W2PQJ5 194 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 CFAP73A6NFT4 308 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 GNPATO15228 680 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 NEFHP12036 1026 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 HSD17B3P37058 310 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 KLK7P49862 253 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 TROAPQ12815 778 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 BLMHQ13867 455 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 SMIM5Q71RC9 77 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 DHTKD1Q96HY7 919 aaPredicted RBP14.4□□□□□ -0.1
NUP54-201ENST00000264883 KRT12Q99456 494 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 TLR10Q9BXR5 811 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 CUEDC2Q9H467 287 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 EXOC1Q9NV70 894 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 SLC5A4Q9NY91 659 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 RNF14Q9UBS8 474 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 SLC12A4Q9UP95 1085 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 GDAQ9Y2T3 454 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 COL24A1Q17RW2 1714 aa14.4□□□□□ -0.1
NUP54-201ENST00000264883 RASSF10A6NK89 507 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 PLEKP08567 350 aaPredicted RBP14.39□□□□□ -0.11
NUP54-201ENST00000264883 LINGO3P0C6S8 592 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 STAT6P42226 847 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 ZNF844Q08AG5 666 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 TRADDQ15628 312 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 ANKS4BQ8N8V4 417 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 SH3GLB2Q9NR46 395 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 PANK4Q9NVE7 773 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 BICDL2A1A5D9 508 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 F8W031 263 aaPredicted RBP14.39□□□□□ -0.11
NUP54-201ENST00000264883 H0YGN5 161 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 SCG2P13521 617 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 CYP7A1P22680 504 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 CTNNA1P35221 906 aaKnown RBP14.39□□□□□ -0.11
NUP54-201ENST00000264883 NLRP5P59047 1200 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 CNKSR1Q969H4 720 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 MTRQ99707 1265 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 DISC1Q9NRI5 854 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 RTCBQ9Y3I0 505 aaKnown RBP14.39□□□□□ -0.11
NUP54-201ENST00000264883 NFS1Q9Y697 457 aa14.39□□□□□ -0.11
NUP54-201ENST00000264883 MINDY4BA8MYZ0 360 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 RHOBTB3O94955 611 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 HLTFQ14527 1009 aaKnown RBP eCLIP14.38□□□□□ -0.11
NUP54-201ENST00000264883 AGBL2Q5U5Z8 902 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 CHMP6Q96FZ7 201 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 NOVA2Q9UNW9 492 aaKnown RBP14.38□□□□□ -0.11
NUP54-201ENST00000264883 A6NHS1 94 aa14.38□□□□□ -0.11
NUP54-201ENST00000264883 LAD1O00515 517 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms