RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 STK17AQ9UEE5 414 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 RREB1Q92766 1687 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
TRAM1-201ENST00000262213 KLHL30Q0D2K2 578 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 SPTY2D1Q68D10 685 aaPredicted RBP19.21■□□□□ 0.67
TRAM1-201ENST00000262213 KDM7AQ6ZMT4 941 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 NLRP3Q96P20 1036 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 CEP72Q9P209 647 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 ANKIB1Q9P2G1 1089 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 TSKSQ9UJT2 592 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 NPHP3-ACAD11A0A0J9YXS1 232 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 E7EVH7 732 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 EPS15P42566 896 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 COASYQ13057 564 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 NAB2Q15742 525 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 UBE2SQ16763 222 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 SUGP1Q8IWZ8 645 aaKnown RBP19.21■□□□□ 0.67
TRAM1-201ENST00000262213 ZNF473Q8WTR7 871 aaKnown RBP19.21■□□□□ 0.67
TRAM1-201ENST00000262213 TAF4BQ92750 862 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 MTMR9Q96QG7 549 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 LZTS2Q9BRK4 669 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 ATP6V0A2Q9Y487 856 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 CDK8P49336 464 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 COBLL1Q53SF7 1204 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 CEP95Q96GE4 821 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 AP1M1Q9BXS5 423 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 EPN3Q9H201 632 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 FKBP3Q00688 224 aaKnown RBP19.2■□□□□ 0.66
TRAM1-201ENST00000262213 ATP6V1G3Q96LB4 118 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 PANK4Q9NVE7 773 aa19.2■□□□□ 0.66
TRAM1-201ENST00000262213 SRP68Q9UHB9 627 aaKnown RBP19.2■□□□□ 0.66
TRAM1-201ENST00000262213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRAM1-201ENST00000262213 GRID2IPA4D2P6 1211 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 BACH1O14867 736 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 MEFVO15553 781 aaPredicted RBP19.19■□□□□ 0.66
TRAM1-201ENST00000262213 PPP1R37O75864 691 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 BAG3O95817 575 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 ACTN1P12814 892 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 IFT88Q13099 833 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 PTGISQ16647 500 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 MEI1Q5TIA1 1274 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 NBPF5PQ86XG9 351 aaPredicted RBP19.19■□□□□ 0.66
TRAM1-201ENST00000262213 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 LUC7LQ9NQ29 371 aaKnown RBP19.19■□□□□ 0.66
TRAM1-201ENST00000262213 CEP104O60308 925 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 FAM26FQ5R3K3 315 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 CLEC10AQ8IUN9 316 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 CCT8L2Q96SF2 557 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
TRAM1-201ENST00000262213 COL16A1Q07092 1604 aaPredicted RBP19.19■□□□□ 0.66
TRAM1-201ENST00000262213 CCDC88AQ3V6T2 1871 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 CDC37Q16543 378 aaPredicted RBP19.18■□□□□ 0.66
TRAM1-201ENST00000262213 SLC18A3Q16572 532 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 NLRP14Q86W24 1093 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 MARCH10Q8NA82 808 aaPredicted RBP19.18■□□□□ 0.66
TRAM1-201ENST00000262213 INPP4AQ96PE3 977 aaPredicted RBP19.18■□□□□ 0.66
TRAM1-201ENST00000262213 GOLGA6L10A6NI86 522 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 IBSPP21815 317 aaPredicted RBP19.18■□□□□ 0.66
TRAM1-201ENST00000262213 ADCY7P51828 1080 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 ASIC2Q16515 512 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 LRRC47Q8N1G4 583 aaKnown RBP19.18■□□□□ 0.66
TRAM1-201ENST00000262213 RAB34Q9BZG1 259 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 RIC8AQ9NPQ8 531 aa19.18■□□□□ 0.66
TRAM1-201ENST00000262213 COL14A1Q05707 1796 aaKnown RBP19.18■□□□□ 0.66
TRAM1-201ENST00000262213 E9PMD0 336 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 MDH1P40925 334 aaKnown RBP19.17■□□□□ 0.66
TRAM1-201ENST00000262213 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 TNNC1P63316 161 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 USP38Q8NB14 1042 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 RNF14Q9UBS8 474 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 LAMB2P55268 1798 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 LOC102724159A0A0B4J2E5 919 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 TMCO5BA8MYB1 307 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 RBAK-RBAKDNI3L0D1 243 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 FXR2P51116 673 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRAM1-201ENST00000262213 PWP2Q15269 919 aaKnown RBP19.17■□□□□ 0.66
TRAM1-201ENST00000262213 RPS6KA1Q15418 735 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 CLEC4GQ6UXB4 293 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 MYCBPAPQ8TBZ2 947 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 ABCB11O95342 1321 aa19.17■□□□□ 0.66
TRAM1-201ENST00000262213 EDIL3O43854 480 aa19.16■□□□□ 0.66
TRAM1-201ENST00000262213 WHAMMQ8TF30 809 aa19.16■□□□□ 0.66
TRAM1-201ENST00000262213 BTDP43251 543 aa19.16■□□□□ 0.66
TRAM1-201ENST00000262213 ODF2Q5BJF6 829 aa19.16■□□□□ 0.66
TRAM1-201ENST00000262213 HERC4Q5GLZ8 1057 aaPredicted RBP19.16■□□□□ 0.66
TRAM1-201ENST00000262213 TEX11Q8IYF3 940 aa19.16■□□□□ 0.66
TRAM1-201ENST00000262213 DNAJC19Q96DA6 116 aa19.16■□□□□ 0.66
TRAM1-201ENST00000262213 DDX47Q9H0S4 455 aaKnown RBP19.16■□□□□ 0.66
TRAM1-201ENST00000262213 A6NNZ2 444 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 TMOD1P28289 359 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 HSD17B3P37058 310 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 TUBB8Q3ZCM7 444 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 CNPY4Q8N129 248 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 UBLCP1Q8WVY7 318 aaPredicted RBP19.15■□□□□ 0.66
TRAM1-201ENST00000262213 EDEM3Q9BZQ6 932 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 PCDHGC5Q9Y5F6 944 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 ITGB3BPQ13352 177 aaPredicted RBP19.15■□□□□ 0.66
TRAM1-201ENST00000262213 SETDB2Q96T68 719 aa19.15■□□□□ 0.66
TRAM1-201ENST00000262213 TAF1DQ9H5J8 278 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms