RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 TMED2Q15363 201 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 TCP11X2Q5H9J9 407 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 NANOGNBQ7Z5D8 188 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 EXOC8Q8IYI6 725 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 TMEM245Q9H330 911 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 LZTS3O60299 673 aaPredicted RBP11.09□□□□□ -0.63
SLF2-201ENST00000238961 NAA35Q5VZE5 725 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 EXD1Q8NHP7 514 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 TSC1Q92574 1164 aa11.09□□□□□ -0.63
SLF2-201ENST00000238961 WDR91A4D1P6 747 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
SLF2-201ENST00000238961 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 FRMD6Q96NE9 622 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 EGFL8Q99944 293 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 ANGPTL2Q9UKU9 493 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 BPIFB4P59827 614 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 KIAA1755Q5JYT7 1200 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 DSTYKQ6XUX3 929 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 MAML1Q92585 1016 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 PPARGC1AQ9UBK2 798 aaKnown RBP11.08□□□□□ -0.64
SLF2-201ENST00000238961 KCNH3Q9ULD8 1083 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 PCDHGB4Q9UN71 923 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 GOLGA8SH3BPF8 625 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 MOCS3O95396 460 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 HDAC4P56524 1084 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 ZKSCAN8Q15776 578 aaPredicted RBP11.08□□□□□ -0.64
SLF2-201ENST00000238961 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 SMAD5Q99717 465 aaKnown RBP11.08□□□□□ -0.64
SLF2-201ENST00000238961 USE1Q9NZ43 259 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 PAIP2BQ9ULR5 123 aaKnown RBP11.08□□□□□ -0.64
SLF2-201ENST00000238961 GRM8O00222 908 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 PAPOLAP51003 745 aaKnown RBP11.08□□□□□ -0.64
SLF2-201ENST00000238961 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 TNFAIP1Q13829 316 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 RBBP7Q16576 425 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 NME9Q86XW9 330 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 NACC1Q96RE7 527 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
SLF2-201ENST00000238961 KDM1AO60341 852 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 OSBPP22059 807 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 SLC44A4Q53GD3 710 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 TBC1D19Q8N5T2 526 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 PPP1R16BQ96T49 567 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 KDM4CQ9H3R0 1056 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 ARMT1Q9H993 441 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 H2AFY2Q9P0M6 372 aaPredicted RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 PI4K2BG5E9Z4 385 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 PRDM1O75626 825 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 ASMTLO95671 621 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 PTK2Q05397 1052 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 ARL13BQ3SXY8 428 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 BLZF1Q9H2G9 400 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 PARVBQ9HBI1 364 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 MSH6P52701 1360 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 CCDC78A2IDD5 438 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 GOLGA8KD6RF30 607 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 INO80B-WBP1J3KQ70 363 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 KCTD2Q14681 263 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 IL16Q14005 1332 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 DDX5P17844 614 aaKnown RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 CCNA1P78396 465 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 MFSD4BQ5TF39 518 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 ADCK2Q7Z695 626 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 PI4K2BQ8TCG2 481 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 CCHCR1Q8TD31 782 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 UTP6Q9NYH9 597 aaKnown RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 MT-ND3P03897 115 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 CAPN1P07384 714 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 ST13P4Q8IZP2 240 aaPredicted RBP11.07□□□□□ -0.64
SLF2-201ENST00000238961 DEPDC7Q96QD5 511 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 MEIS1O00470 390 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 SLFN14P0C7P3 912 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 DCAF15Q66K64 600 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 VPS39Q96JC1 886 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 CALN1Q9BXU9 219 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 NDFIP2Q9NV92 336 aa11.07□□□□□ -0.64
SLF2-201ENST00000238961 DEUP1Q05D60 604 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 MESDQ14696 234 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 ZNF304Q9HCX3 659 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 GTSE1Q9NYZ3 720 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 GPR1P46091 355 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
SLF2-201ENST00000238961 DDX53Q86TM3 631 aaKnown RBP11.06□□□□□ -0.64
SLF2-201ENST00000238961 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
SLF2-201ENST00000238961 C1orf131Q8NDD1 294 aaKnown RBP11.06□□□□□ -0.64
SLF2-201ENST00000238961 INTS9Q9NV88 658 aaKnown RBP11.06□□□□□ -0.64
SLF2-201ENST00000238961 TNRQ92752 1358 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms