RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SRPRBQ9Y5M8 271 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 COBLO75128 1261 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 CYP3A4P08684 503 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 ARP10275 920 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 AFMP43652 599 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 LBX1P52954 281 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 GNASQ5JWF2 1037 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 PRAMEF19Q5SWL8 479 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 XKR9Q5GH70 373 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 RNF180Q86T96 592 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 CREBRFQ8IUR6 639 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 NIPA1Q7RTP0 329 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 RNF208Q9H0X6 261 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 DDX19AQ9NUU7 478 aaKnown RBP12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 KBTBD13C9JR72 458 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 MSH4O15457 936 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 POLR2DO15514 142 aaKnown RBP12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 NASPP49321 788 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 DNM2P50570 870 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 CYP2W1Q8TAV3 490 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 KIAA1024Q9UPX6 916 aa12.46□□□□□ -0.41
TNFAIP3-201ENST00000237289 MYH4Q9Y623 1939 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 POTEMA6NI47 508 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 TRAK2O60296 914 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 PRPHP41219 470 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 CPT1AP50416 773 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 IGBP1P78318 339 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 Q4G0T1 1027 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 SWSAP1Q6NVH7 229 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 IL31RAQ8NI17 732 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 CHAMP1Q96JM3 812 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZNF302Q9NR11 478 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZDHHC9Q9Y397 364 aa12.46□□□□□ -0.42
TNFAIP3-201ENST00000237289 ELP1O95163 1332 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 FAM86B1E9PN63 330 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 MEIS1O00470 390 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 SLC37A4O43826 429 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 FAM86B2P0C5J1 330 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 MARK3P27448 753 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 CDC25AP30304 524 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 ADCYAP1R1P41586 468 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 STIM1Q13586 685 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 CAMK4Q16566 473 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 MSCO60682 206 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 NACC1Q96RE7 527 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 GABBR1Q9UBS5 961 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 FAM13AO94988 1023 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 TPM4P67936 248 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 ASIC1P78348 528 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 CCDC144BQ3MJ40 725 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 NEK9Q8TD19 979 aa12.45□□□□□ -0.42
TNFAIP3-201ENST00000237289 LIG1P18858 919 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CMA1P23946 247 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CIITAP33076 1130 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 EPHA7Q15375 998 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 DGKDQ16760 1214 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 METTL13Q8N6R0 699 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 FAM167AQ96KS9 214 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 TMEM60Q9H2L4 133 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 GABRQQ9UN88 632 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 UBIAD1Q9Y5Z9 338 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 STAT5BP51692 787 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 NPLOC4Q8TAT6 608 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 R3HDMLQ9H3Y0 253 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 WBP1LQ9NX94 342 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 SYNGAP1Q96PV0 1343 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 QARSP47897 775 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CLK2P49760 499 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 PDIA5Q14554 519 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZNF792Q3KQV3 632 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 METTL7BQ6UX53 244 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 GJA10Q969M2 543 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 DACT1Q9NYF0 836 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CTAGE5O15320 804 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 TMOD1P28289 359 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CCL14Q16627 93 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms