RNA–Protein interactions for RNA: ENST00000196169.7

TDRD3-201, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-201ENST00000196169 PNMA5Q96PV4 448 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 COL4A1P02462 1669 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 ORC4O43929 436 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 PRLRP16471 622 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 CDK17Q00537 523 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 CALCRLQ16602 461 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 KRT71Q3SY84 523 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 LRRC55Q6ZSA7 311 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 MICALCLQ6ZW33 695 aa13.13□□□□□ -0.31
TDRD3-201ENST00000196169 COL18A1P39060 1754 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
TDRD3-201ENST00000196169 FSBPO95073 299 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 FAM107AO95990 144 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 CDC37Q16543 378 aaPredicted RBP13.12□□□□□ -0.31
TDRD3-201ENST00000196169 UBE2SQ16763 222 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 FIGNQ5HY92 759 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 CPLX4Q7Z7G2 160 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
TDRD3-201ENST00000196169 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 NTSR2O95665 410 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 HNRNPH3P31942 346 aaKnown RBP13.12□□□□□ -0.31
TDRD3-201ENST00000196169 ZNF844Q08AG5 666 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 TCERG1LQ5VWI1 586 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 USP38Q8NB14 1042 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 TRIM51Q9BSJ1 452 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 ATP8A1Q9Y2Q0 1164 aa13.12□□□□□ -0.31
TDRD3-201ENST00000196169 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 TTI1O43156 1089 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 SLC9A1P19634 815 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 TAF1P21675 1872 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 GSCP56915 257 aaPredicted RBP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 GJB7Q6PEY0 223 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 GMNCA6NCL1 334 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 E9PMD0 336 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 KRIT1O00522 736 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 SKAP2O75563 359 aaPredicted RBP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 CDC25CP30307 473 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 PTK2Q05397 1052 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 NAB2Q15742 525 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 INTS5Q6P9B9 1019 aaKnown RBP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
TDRD3-201ENST00000196169 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
TDRD3-201ENST00000196169 FGRP09769 529 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 TNNC1P63316 161 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ITIH3Q06033 890 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 GRM4Q14833 912 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 MEI1Q5TIA1 1274 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ZNF572Q7Z3I7 529 aaPredicted RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 MYOCDQ8IZQ8 938 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 SPAG5Q96R06 1193 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 TSG101Q99816 390 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 BAIAP2L1Q9UHR4 511 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 CAMTA2O94983 1202 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 SERPING1P05155 500 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 IFNAR2P48551 515 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 SEC16BQ96JE7 1060 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 IKZF4Q9H2S9 585 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 HMGB1P1B2RPK0 211 aaPredicted RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 CHUKO15111 745 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 PJA2O43164 708 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 NF2P35240 595 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 SLCO1A2P46721 670 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ASIC2Q16515 512 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 UBAP2Q5T6F2 1119 aaKnown RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
TDRD3-201ENST00000196169 ANKS1AQ92625 1134 aa13.1□□□□□ -0.31
TDRD3-201ENST00000196169 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms