RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 NIPA1Q7RTP0 329 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SPTLC3Q9NUV7 552 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CYP39A1Q9NYL5 469 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 NFE2L3Q9Y4A8 694 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 E9PMD0 336 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 TPM2P07951 284 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ARHGEF16Q5VV41 709 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 STK24Q9Y6E0 443 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CCDC186Q7Z3E2 898 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 MRFAP1L1Q96HT8 127 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 LOXHD1Q8IVV2 1947 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SYNRGQ9UMZ2 1314 aa22■■□□□ 1.11
TNFRSF1A-201ENST00000162749 UNCXA6NJT0 531 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 HERVK_113P62684 666 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 B3GNT9Q6UX72 402 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 GIMAP8Q8ND71 665 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SLC10A4Q96EP9 437 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 EIF2AK1Q9BQI3 630 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 DOCK5Q9H7D0 1870 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CHMP2AO43633 222 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 MYCLP12524 364 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CYP4A11Q02928 519 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CNNM4Q6P4Q7 775 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 FASTKD5Q7L8L6 764 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CHST13Q8NET6 341 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 RIT2Q99578 217 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 MAF1Q9H063 256 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 JADE2Q9NQC1 790 aa21.99■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PRCPP42785 496 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 MTMR1Q13613 665 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 DYMQ7RTS9 669 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 DDX12PQ92771 950 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 HSD17B14Q9BPX1 270 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 POLR3CQ9BUI4 534 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 MAPK8IP1Q9UQF2 711 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 STX17P56962 302 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PDE4DQ08499 809 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SNAPC2Q13487 334 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 GPAT2Q6NUI2 795 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 RIOX2Q8IUF8 465 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 TEKT3Q9BXF9 490 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 LRRC27Q9C0I9 530 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SPATC1LQ9H0A9 340 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 EXOC1Q9NV70 894 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 RGL1Q9NZL6 768 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CTNND2Q9UQB3 1225 aa21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ZNFX1Q9P2E3 1918 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PLA2G4BP0C869 781 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ZNF18P17022 549 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CDC25BP30305 580 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PSMC6P62333 389 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 UNC13DQ70J99 1090 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 VSIG10LQ86VR7 867 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 DRC7Q8IY82 874 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 NSUN6Q8TEA1 469 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 UNC45AQ9H3U1 944 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 TRPM7Q96QT4 1865 aa21.97■■□□□ 1.11
TNFRSF1A-201ENST00000162749 DHX15O43143 795 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 NR3C2P08235 984 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ITGB3BPQ13352 177 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 HSP90AA4PQ58FG1 418 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ADSSL1Q8N142 457 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 CCDC47Q96A33 483 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 DNAJC19Q96DA6 116 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PAGR1Q9BTK6 254 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 AGO4Q9HCK5 861 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PKD2L1Q9P0L9 805 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PVALEFA0A1B0GWK0 134 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SSBP05455 408 aaKnown RBP eCLIP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SLC12A3P55017 1021 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 FKBP1BP68106 108 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 FANCCQ00597 558 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 STK4Q13043 487 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PAK1Q13153 545 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 XRRA1Q6P2D8 792 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 XPO4Q9C0E2 1151 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 GBA2Q9HCG7 927 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SAMSN1Q9NSI8 373 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 IFNKQ9P0W0 207 aa21.96■■□□□ 1.11
TNFRSF1A-201ENST00000162749 TESPA1A2RU30 521 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CNMDO75829 334 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 SLITRK3O94933 977 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 FCER1AP12319 257 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CCND2P30279 289 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CCDC144BQ3MJ40 725 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 SPATA1Q5VX52 437 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 RWDD2AQ9UIY3 292 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 DNM3Q9UQ16 869 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 LRMPQ12912 555 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 PABPC4Q13310 644 aaKnown RBP eCLIP21.95■■□□□ 1.11e-20■■■□□ 18.3
TNFRSF1A-201ENST00000162749 TXNRD2Q9NNW7 524 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 TUFT1Q9NNX1 390 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 FBXO40Q9UH90 709 aa21.95■■□□□ 1.1
TNFRSF1A-201ENST00000162749 DDX39AO00148 427 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CYP11B2P19099 503 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 EHHADHQ08426 723 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CTTNQ14247 550 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 ANKRD35Q8N283 1001 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms