RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ccdc87Q8CDL9 855 aa18.53■□□□□ 0.56
Ctcf-201ENSMUST00000005841 MtrA6H5Y3 1253 aa18.53■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Ccdc152E9PX14 254 aa18.53■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Susd4Q8BH32 490 aa18.53■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Map7d1A2AJI0 846 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Scg2Q03517 617 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Smarcad1Q04692 1021 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Sgms1Q8VCQ6 419 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 CenphQ9QYM8 241 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Rnf4Q9QZS2 194 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Ankrd63A2ARS0 390 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Hdhd2Q3UGR5 259 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Rap1gap2Q5SVL6 712 aaKnown RBP18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Mtss1lQ6P9S0 715 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 AmphQ7TQF7 686 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Tut1Q8R3F9 869 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 Ergic2Q9CR89 377 aa18.52■□□□□ 0.56
Ctcf-201ENSMUST00000005841 PltpP55065 493 aa18.52■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Znf827Q505G8 1078 aa18.52■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Specc1Q5SXY1 1067 aa18.52■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Lilrb4Q64281 335 aa18.52■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Agap1Q8BXK8 857 aaKnown RBP18.52■□□□□ 0.55
Ctcf-201ENSMUST00000005841 UvssaQ9D479 717 aa18.52■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Tnnc1P19123 161 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 R3hdm2Q80TM6 1044 aaKnown RBP18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Champ1Q8K327 802 aaKnown RBP18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Olfr805Q8VFI4 319 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pagr1aQ99L02 253 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 EhhadhQ9DBM2 718 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Itga9B8JK39 1036 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Cyp2b9P12790 491 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Sox13Q04891 613 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 ChukQ60680 745 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Arhgef2Q60875 985 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rgl2Q61193 778 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Arfgap2Q99K28 520 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Fxr2Q9WVR4 673 aaKnown RBP18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Plxnb2B2RXS4 1842 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ly75Q60767 1723 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Gm5169Q5M8P2 212 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nlrp4fQ66X05 959 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ccdc40Q8BI79 1192 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Amigo3Q8C2S7 508 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Abcf2Q99LE6 628 aaKnown RBP18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Slc26a4Q9R155 780 aa18.51■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Hsf3D0VYS2 492 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Trim34bJ3QNR8 485 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Zbtb1Q91VL9 713 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Q9D1Z2 194 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Cul5Q9D5V5 780 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Slc12a7Q9WVL3 1083 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ssrp1Q08943 708 aaKnown RBP18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ttll4Q80UG8 1193 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Dph5Q9CWQ0 281 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pkd2l2Q9JLG4 621 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Tmed8Q3UHI4 326 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rbm26Q6NZN0 1012 aaKnown RBP18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rbm15bQ6PHZ5 887 aaKnown RBP18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 AagabQ8R2R3 316 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Q9DA42 136 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Tmem174Q9DCX7 243 aa18.5■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Otud7bB2RUR8 840 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Mboat4P0C7A3 435 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Zdhhc18Q5Y5T2 380 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Phc1Q64028 1012 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 NfrkbQ6PIJ4 1296 aaKnown RBP18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rell1Q8K2J7 272 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Xpo6Q924Z6 1125 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Krt18P05784 423 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Mcm7Q61881 719 aaKnown RBP18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Trim37Q6PCX9 961 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Fam163bQ8BUM6 167 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Btbd9Q8C726 612 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Scn9aQ62205 1984 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Casp8O89110 480 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rbm46P86049 533 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rnf207Q3V3A7 635 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Arhgef19Q8BWA8 802 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Actl9Q8CG27 415 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nip7Q9CXK8 180 aaKnown RBP18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Gys1Q9Z1E4 738 aaKnown RBP18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Letm1Q9Z2I0 738 aa18.49■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Gm45837F7D3W5 961 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ncf2O70145 525 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Sin3bQ62141 1098 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Mcf2lQ64096 1149 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nr2e1Q64104 385 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Haus1Q8BHX1 278 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 RbakQ8BQC8 711 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Bbs7Q8K2G4 715 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pde2aQ922S4 916 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 CalrP14211 416 aaKnown RBP18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Naa15Q80UM3 865 aaKnown RBP18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Cog5Q8C0L8 829 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Cwf19l1Q8CI33 537 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Znf445Q8R2V3 986 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Mageb16Q9CWV4 363 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Edf1Q9JMG1 148 aaKnown RBP18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Sel1lQ9Z2G6 790 aa18.48■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Myl3P09542 204 aa18.47■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms