RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 MYH6P13533 1939 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 MCM3APO60318 1980 aa16.33■□□□□ 0.2
SDHD-209ENST00000640554 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 PQBP1O60828 265 aaKnown RBP16.32■□□□□ 0.2
SDHD-209ENST00000640554 MYL3P08590 195 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 UBE2SQ16763 222 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 TYW1BQ6NUM6 668 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 AFG1LQ8WV93 481 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 PRO3102Q9H379 93 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
SDHD-209ENST00000640554 COLQQ9Y215 455 aaPredicted RBP16.32■□□□□ 0.2
SDHD-209ENST00000640554 GGPS1O95749 300 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 MMP3P08254 477 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 HOXD8P13378 290 aaPredicted RBP16.31■□□□□ 0.2
SDHD-209ENST00000640554 SYN1P17600 705 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 CLK2P49760 499 aaKnown RBP16.31■□□□□ 0.2
SDHD-209ENST00000640554 AK2P54819 239 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 FAAP100Q0VG06 881 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 GALNT17Q6IS24 598 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 NFRKBQ6P4R8 1299 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
SDHD-209ENST00000640554 KATNAL1Q9BW62 490 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 LRRC37A2A6NM11 1700 aa16.31■□□□□ 0.2
SDHD-209ENST00000640554 XBP1P17861 261 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
SDHD-209ENST00000640554 SREBF1P36956 1147 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
SDHD-209ENST00000640554 STK3Q13188 491 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 WASF1Q92558 559 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 ANO3Q9BYT9 981 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 JADE2Q9NQC1 790 aa16.3■□□□□ 0.2
SDHD-209ENST00000640554 PRDM5Q9NQX1 630 aaPredicted RBP16.3■□□□□ 0.2
SDHD-209ENST00000640554 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 CD4P01730 458 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 CYP3A4P08684 503 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 RAG1P15918 1043 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 PTGS1P23219 599 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
SDHD-209ENST00000640554 SP2Q02086 613 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 SCRN1Q12765 414 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 HABP4Q5JVS0 413 aaKnown RBP16.29■□□□□ 0.2
SDHD-209ENST00000640554 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 MXRA8Q9BRK3 442 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
SDHD-209ENST00000640554 TBX21Q9UL17 535 aa16.29■□□□□ 0.2
SDHD-209ENST00000640554 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 NOP56O00567 594 aaKnown RBP16.28■□□□□ 0.2
SDHD-209ENST00000640554 TIMP1P01033 207 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 ITGB5P18084 799 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 NLRP5P59047 1200 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 MTMR1Q13613 665 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 NBPF20Q3BBV1 942 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 CEP55Q53EZ4 464 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
SDHD-209ENST00000640554 UBE2OQ9C0C9 1292 aaKnown RBP16.28■□□□□ 0.2
SDHD-209ENST00000640554 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
SDHD-209ENST00000640554 MEIS1O00470 390 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 ZNF76P36508 570 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 PSMC6P62333 389 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 ARHGAP4P98171 946 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 SEMA3FQ13275 785 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 HSDL1Q3SXM5 330 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 ZFP91Q96JP5 570 aaPredicted RBP16.27■□□□□ 0.2
SDHD-209ENST00000640554 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
SDHD-209ENST00000640554 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
SDHD-209ENST00000640554 CEP290O15078 2479 aa16.27■□□□□ 0.19
SDHD-209ENST00000640554 F2P00734 622 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 USP11P51784 963 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
SDHD-209ENST00000640554 ME3Q16798 604 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 MFSD5Q6N075 450 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 SH3RF1Q7Z6J0 888 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 DAGLBQ8NCG7 672 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 CRYGNQ8WXF5 182 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 KCNH7Q9NS40 1196 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 PCDHA4Q9UN74 947 aa16.26■□□□□ 0.19
SDHD-209ENST00000640554 NFASCO94856 1347 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 HAS3O00219 553 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 KCNA2P16389 499 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 PSEN2P49810 448 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 RABEP1Q15276 862 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 FAM47CQ5HY64 1035 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 TDHQ8IZJ6 230 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 TMEM199Q8N511 208 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms