RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ZBBXA8MT70 800 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 NOP56O00567 594 aaKnown RBP21.81■■□□□ 1.08
CLN6-213ENST00000636212 ZBTB43O43298 467 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 FIBPO43427 364 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 SORBS3O60504 671 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 NEDD9Q14511 834 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 RAB30Q15771 203 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 PCNX4Q63HM2 1172 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 APOA5Q6Q788 366 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 NLRX1Q86UT6 975 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 CAGE1Q8TC20 777 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 KAT2BQ92831 832 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 TIFAQ96CG3 184 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 ZFP91Q96JP5 570 aaPredicted RBP21.81■■□□□ 1.08
CLN6-213ENST00000636212 CDX2Q99626 313 aaPredicted RBP21.81■■□□□ 1.08
CLN6-213ENST00000636212 EHMT1Q9H9B1 1298 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 SLC4A7Q9Y6M7 1214 aa21.81■■□□□ 1.08
CLN6-213ENST00000636212 SPDYE3A6NKU9 549 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 F2P00734 622 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 ZNF286BP0CG31 522 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
CLN6-213ENST00000636212 RTN1Q16799 776 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 KIAA0753Q2KHM9 967 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 HEATR3Q7Z4Q2 680 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 DEFB128Q7Z7B8 93 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 INPP4AQ96PE3 977 aaPredicted RBP21.8■■□□□ 1.08
CLN6-213ENST00000636212 TTYH1Q9H313 450 aaPredicted RBP21.8■■□□□ 1.08
CLN6-213ENST00000636212 RTEL1Q9NZ71 1219 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 GTF2IRD1Q9UHL9 959 aa21.8■■□□□ 1.08
CLN6-213ENST00000636212 NAP1L2Q9ULW6 460 aaPredicted RBP21.8■■□□□ 1.08
CLN6-213ENST00000636212 MEIS2O14770 477 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 REC8O95072 547 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 ICAM3P32942 547 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 MRPS9P82933 396 aaKnown RBP21.79■■□□□ 1.08
CLN6-213ENST00000636212 SP2Q02086 613 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 COL9A3Q14050 684 aaPredicted RBP21.79■■□□□ 1.08
CLN6-213ENST00000636212 HSDL1Q3SXM5 330 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 GDF6Q6KF10 455 aaPredicted RBP21.79■■□□□ 1.08
CLN6-213ENST00000636212 RASEFQ8IZ41 740 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 AFAP1L1Q8TED9 768 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 FTOQ9C0B1 505 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLN6-213ENST00000636212 HDAC6Q9UBN7 1215 aa21.79■■□□□ 1.08
CLN6-213ENST00000636212 GOLGA8AA7E2F4 631 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 GOLGA8BA8MQT2 603 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 IQCF3P0C7M6 154 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 HOXD8P13378 290 aaPredicted RBP21.78■■□□□ 1.08
CLN6-213ENST00000636212 ADCK5Q3MIX3 580 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 GIMAP8Q8ND71 665 aaPredicted RBP21.78■■□□□ 1.08
CLN6-213ENST00000636212 CDHR1Q96JP9 859 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 TCEANC2Q96MN5 208 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 PBX4Q9BYU1 374 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 ZNF576Q9H609 170 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 CXXC1Q9P0U4 656 aaPredicted RBP21.78■■□□□ 1.08
CLN6-213ENST00000636212 MYH7BA7E2Y1 1941 aa21.78■■□□□ 1.08
CLN6-213ENST00000636212 KLF18A0A0U1RQI7 1052 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 hCG_1642624A0A1W2PR95 340 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 GRXCR1A8MXD5 290 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 SPATA31C2B4DYI2 1134 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 HAS3O00219 553 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 PARNO95453 639 aaKnown RBP21.77■■□□□ 1.08
CLN6-213ENST00000636212 FOSL2P15408 326 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 METTL7BQ6UX53 244 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 MYLIPQ8WY64 445 aa21.77■■□□□ 1.08
CLN6-213ENST00000636212 GPKOWQ92917 476 aaPredicted RBP eCLIP21.77■■□□□ 1.08
CLN6-213ENST00000636212 CCDC196A0A1B0GTZ2 297 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 RCAN1P53805 252 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 NAPAP54920 295 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 PTK7Q13308 1070 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 BLOC1S2Q6QNY1 142 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 CYFIP1Q7L576 1253 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 TEX2Q8IWB9 1127 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
CLN6-213ENST00000636212 JAKMIP1Q96N16 626 aaKnown RBP21.76■■□□□ 1.07
CLN6-213ENST00000636212 USP26Q9BXU7 913 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 SLC28A3Q9HAS3 691 aa21.76■■□□□ 1.07
CLN6-213ENST00000636212 H3BRB1 525 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 SELPP16109 830 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 PSMA5P28066 241 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 PPP1R18Q6NYC8 613 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 GPRASP2Q96D09 838 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 SENP7Q9BQF6 1050 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 TUT1Q9H6E5 874 aaKnown RBP21.75■■□□□ 1.07
CLN6-213ENST00000636212 ZNF215Q9UL58 517 aaPredicted RBP21.75■■□□□ 1.07
CLN6-213ENST00000636212 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 CNTNAP5Q8WYK1 1306 aa21.75■■□□□ 1.07
CLN6-213ENST00000636212 ATP2A2P16615 1042 aaKnown RBP21.74■■□□□ 1.07
CLN6-213ENST00000636212 HSPA4P34932 840 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 PBX2P40425 430 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 UBE2SQ16763 222 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 LRRC8DQ7L1W4 858 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 MAFAQ8NHW3 353 aaPredicted RBP21.74■■□□□ 1.07
CLN6-213ENST00000636212 GAS2L1Q99501 681 aaPredicted RBP21.74■■□□□ 1.07
CLN6-213ENST00000636212 C16orf70Q9BSU1 422 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 GLT8D2Q9H1C3 349 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 PCDHA6Q9UN73 950 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 PCDHA8Q9Y5H6 950 aa21.74■■□□□ 1.07
CLN6-213ENST00000636212 TANC1Q9C0D5 1861 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 BAIAP3O94812 1187 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms