RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 XRN1Q8IZH2 1706 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 TRIM75PA6NK02 468 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 HNRNPCL2B2RXH8 293 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PI4K2BG5E9Z4 385 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 FOXD2O60548 495 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 HNRNPCL1O60812 293 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CLASP2O75122 1294 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GFAPP14136 432 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PSMA4P25789 261 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ANXA13P27216 316 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 HNF1BP35680 557 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ATP5OP48047 213 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 MXRA7P84157 204 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ATP2B2Q01814 1243 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 AP1B1Q10567 949 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SCRN1Q12765 414 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PKP1Q13835 747 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 KCNB1Q14721 858 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 SAFBQ15424 915 aaKnown RBP eCLIP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 GEN1Q17RS7 908 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC14Q49A88 953 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 THEMIS2Q5TEJ8 643 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PI4K2BQ8TCG2 481 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 TTC25Q96NG3 672 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ADNPQ9H2P0 1102 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ARFGAP3Q9NP61 516 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 KCND1Q9NSA2 647 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 CUEDC1Q9NWM3 386 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 PIH1D1Q9NWS0 290 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 EIF2B4Q9UI10 523 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 ADAM21Q9UKJ8 722 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 EXOC7Q9UPT5 735 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 MAPK8IP1Q9UQF2 711 aa4.25□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRD1A4D1F6 860 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC169A6NNP5 214 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ZBED4O75132 1171 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ALDH1L1O75891 902 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SCGB1D2O95969 90 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 NPPAP01160 153 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 EEF2P13639 858 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 LRPAP1P30533 357 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 PRKAR2BP31323 418 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 HNRNPH1P31943 449 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SOX11P35716 441 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 STT3AP46977 705 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 NLRP5P59047 1200 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 EXOSC9Q06265 439 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 PRKG1Q13976 671 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 EMC10Q5UCC4 262 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TMEM53Q6P2H8 277 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ELMSAN1Q6PJG2 1045 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ARHGEF18Q6ZSZ5 1173 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC83Q8IWF9 413 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 NFATC2IPQ8NCF5 419 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SPATA18Q8TC71 538 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 RBM14Q96PK6 669 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 PSKH2Q96QS6 385 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ZSCAN16Q9H4T2 348 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 QTRT2Q9H974 415 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 L2HGDHQ9H9P8 463 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SHPRHQ149N8 1683 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 hCG_1642624A0A1W2PR95 340 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 M0QX08 132 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TTI1O43156 1089 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 MAP3K7O43318 606 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 KPNA6O60684 536 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 GMNNO75496 209 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TBC1D8O95759 1140 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CD9P21926 228 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 PSMA3P25788 255 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SLC8A1P32418 973 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TCF7P36402 384 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ST5P78524 1137 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ARID5AQ03989 594 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 IFRD2Q12894 506 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 FBXO31Q5XUX0 539 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 NUGGCQ68CJ6 796 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 RCSD1Q6JBY9 416 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 MIER3Q7Z3K6 550 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ZGPATQ8N5A5 531 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CAGE1Q8TC20 777 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 BARD1Q99728 777 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 GORASP1Q9BQQ3 440 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 UBXN6Q9BZV1 441 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SERHL2Q9H4I8 314 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TCF7L2Q9NQB0 619 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 FANCLQ9NW38 375 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SUCLA2Q9P2R7 463 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SFI1A8K8P3 1242 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SCAMP3O14828 347 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 RHOBTB3O94955 611 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CTCFP49711 727 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 GSDMDP57764 484 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 UBXN1Q04323 297 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ERCC6LQ2NKX8 1250 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC153Q494R4 210 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms