RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 OAS2P29728 719 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 HOXA13P31271 388 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 FAM83BQ5T0W9 1011 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 EFCAB13Q8IY85 973 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 P3H4Q92791 437 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 RMDN3Q96TC7 470 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 PLEKHG2Q9H7P9 1386 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 ZNF521Q96K83 1311 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 CIB2O75838 187 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 S100BP04271 92 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 CIITAP33076 1130 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 MORC3Q14149 939 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 HLFQ16534 295 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 KRT12Q99456 494 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 A0A0G2JLW4 131 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 K7ERI5 159 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 MED7O43513 233 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 PSMC2P35998 433 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 KCNJ6P48051 423 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 RASGRP4Q8TDF6 673 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 NSUN6Q8TEA1 469 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 GRK7Q8WTQ7 553 aa10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLTCL1-211ENST00000621271 KBTBD13C9JR72 458 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 RPN1P04843 607 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 RECQLP46063 649 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 JAK3P52333 1124 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 VPS72Q15906 364 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 EXOC3L4Q17RC7 722 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 PI16Q6UXB8 463 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 PSMB7Q99436 277 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 RAVER2Q9HCJ3 691 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 ZNRF3Q9ULT6 936 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 REREQ9P2R6 1566 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 CLTCQ00610 1675 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 H7C0C1 242 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 NOL3O60936 208 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 ATP5OP48047 213 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 EPHB1P54762 984 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 NEDD9Q14511 834 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 LONRF3Q496Y0 759 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 TMED8Q6PL24 325 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 B4GALNT4Q76KP1 1039 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 PRDM15P57071 1507 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 GSTA1P08263 222 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 GSTA2P09210 222 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 KCNA4P22459 653 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 POLR2FP61218 127 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 BFSP1Q12934 665 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 GDAP1Q8TB36 358 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 SYMPKQ92797 1274 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 UBN1Q9NPG3 1134 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 LMTK2Q8IWU2 1503 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 TET3O43151 1660 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 A6NNZ2 444 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 KIF28PB7ZC32 967 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 F8W8V4 182 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 NR2F2P24468 414 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 CHRNA5P30532 468 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 SATB1Q01826 763 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 TUBB8Q3ZCM7 444 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 SP8Q8IXZ3 490 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 MICALL2Q8IY33 904 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 ZFYVE28Q9HCC9 887 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 RNF146Q9NTX7 359 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 MINPP1Q9UNW1 487 aa10.65□□□□□ -0.7
CLTCL1-211ENST00000621271 KCNQ2O43526 872 aa10.65□□□□□ -0.71
CLTCL1-211ENST00000621271 PHBP35232 272 aa10.65□□□□□ -0.71
CLTCL1-211ENST00000621271 ARL4AP40617 200 aa10.65□□□□□ -0.71
CLTCL1-211ENST00000621271 NDUFAF2Q8N183 169 aa10.65□□□□□ -0.71
CLTCL1-211ENST00000621271 SPDYE1Q8NFV5 336 aaPredicted RBP10.65□□□□□ -0.71
CLTCL1-211ENST00000621271 TLR7Q9NYK1 1049 aaKnown RBP10.65□□□□□ -0.71
CLTCL1-211ENST00000621271 DTNBO60941 627 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 FAM186BQ8IYM0 893 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 ZBTB9Q96C00 473 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 CHMP6Q96FZ7 201 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 TRIM56Q9BRZ2 755 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 RAB17Q9H0T7 212 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 FNDC3AQ9Y2H6 1198 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 MYO1FO00160 1098 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 MEIS1O00470 390 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 PHKA2P46019 1235 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 SH3RF3Q8TEJ3 882 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 RAB3IPQ96QF0 476 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 HPDP32754 393 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 SNAP25P60880 206 aa10.64□□□□□ -0.71
CLTCL1-211ENST00000621271 MTMR1Q13613 665 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms