RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZKSCAN8Q15776 578 aaPredicted RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 NBPF9Q3BBW0 867 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 CCDC38Q502W7 563 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 TCERG1LQ5VWI1 586 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 PPP4R3AQ6IN85 833 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 CCDC84Q86UT8 332 aaPredicted RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 CPSF2Q9P2I0 782 aaKnown RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 CNOT8Q9UFF9 292 aaKnown RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 STX8Q9UNK0 236 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 PLAGL2Q9UPG8 496 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 MAP3K15Q6ZN16 1313 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 CCDC189A1A4V9 331 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 SART1O43290 800 aaKnown RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 TRIM37O94972 964 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 MMEP08473 750 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 KRT13P13646 458 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 COPB2P35606 906 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 FLT3P36888 993 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 KCNB1Q14721 858 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 LRRC14Q15048 493 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 PUM3Q15397 648 aaKnown RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 GNPTABQ3T906 1256 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 CAPRIN2Q6IMN6 1127 aaKnown RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 DNAJC10Q8IXB1 793 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 CALML4Q96GE6 196 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 LBHD1Q9BQE6 289 aaPredicted RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 A1CFQ9NQ94 594 aaKnown RBP7.32□□□□□ -1.24
LMO3-235ENST00000616247 MST1RQ04912 1400 aa7.32□□□□□ -1.24
LMO3-235ENST00000616247 SLIT1O75093 1534 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 NRXN3Q9Y4C0 1643 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 ATP6V1G2O95670 118 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 GOLGA8HP0CJ92 632 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 AMPD3Q01432 767 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 ZNF844Q08AG5 666 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 TXNRD1Q16881 649 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 CHADLQ6NUI6 762 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 OTUD6AQ7L8S5 288 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 ANKRD42Q8N9B4 389 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 GIMAP8Q8ND71 665 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 PRCCQ92733 491 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 CUL5Q93034 780 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 SAAL1Q96ER3 474 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 FAXDC2Q96IV6 333 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 TSG101Q99816 390 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 KCNK9Q9NPC2 374 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 TSKSQ9UJT2 592 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 NWD1Q149M9 1564 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 MPHOSPH10O00566 681 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 TTI1O43156 1089 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 TRAPPC3O43617 180 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 KRT18P05783 430 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 GNAT2P19087 354 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 CALML3P27482 149 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 PLTPP55058 493 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 ELF3P78545 371 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 EVX2Q03828 476 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 CNNM4Q6P4Q7 775 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 PEX26Q7Z412 305 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 YTHDF3Q7Z739 585 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 PIK3R5Q8WYR1 880 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 KLHL29Q96CT2 875 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 CHMP6Q96FZ7 201 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 PAIP2Q9BPZ3 127 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 UBA5Q9GZZ9 404 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 INTS9Q9NV88 658 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 RBM28Q9NW13 759 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 SWAP70Q9UH65 585 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 AKAP12Q02952 1782 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 CCT8L1PA6NM43 557 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 RGS16O15492 202 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 C21orf2O43822 256 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 FGFR1OPO95684 399 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 ITGA4P13612 1032 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 ARID4AP29374 1257 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 PCK1P35558 622 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 CTSWP56202 376 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 MAN2A1Q16706 1144 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 NAALADL2Q58DX5 795 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 TMTC3Q6ZXV5 915 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 SV2BQ7L1I2 683 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 ZBTB38Q8NAP3 1195 aaPredicted RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 LMBR1Q8WVP7 490 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 PSMD1Q99460 953 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 TRIM51Q9BSJ1 452 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 GDF3Q9NR23 364 aa7.31□□□□□ -1.24
LMO3-235ENST00000616247 UTP11Q9Y3A2 253 aaKnown RBP7.31□□□□□ -1.24
LMO3-235ENST00000616247 A0A087X0T9 212 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 EME2A4GXA9 379 aaPredicted RBP7.3□□□□□ -1.24
LMO3-235ENST00000616247 RAD21O60216 631 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 EVI5O60447 810 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 FAM228BP0C875 321 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 CHN1P15882 459 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 DRP2Q13474 957 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 PLCB4Q15147 1175 aa7.3□□□□□ -1.24
LMO3-235ENST00000616247 ALX1Q15699 326 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms