RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ZNF200P98182 395 aaPredicted RBP20.71■□□□□ 0.91
SMN2-213ENST00000614240 GRB10Q13322 594 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 IKBKEQ14164 716 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 PGM5Q15124 567 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 MYSM1Q5VVJ2 828 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 VSIG10LQ86VR7 867 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 RUFY2Q8WXA3 655 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 MTMR8Q96EF0 704 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 NECAB3Q96P71 396 aaPredicted RBP20.71■□□□□ 0.91
SMN2-213ENST00000614240 COG5Q9UP83 839 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
SMN2-213ENST00000614240 TANC1Q9C0D5 1861 aa20.71■□□□□ 0.91
SMN2-213ENST00000614240 HAS3O00219 553 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 EFCAB14O75071 495 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 RGS20O76081 388 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 CXCL10P02778 98 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 GHRHRQ02643 423 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 GRM4Q14833 912 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 ZNF618Q5T7W0 954 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
SMN2-213ENST00000614240 ZFP91Q96JP5 570 aaPredicted RBP20.7■□□□□ 0.9
SMN2-213ENST00000614240 PIGSQ96S52 555 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 IL25Q9H293 177 aa20.7■□□□□ 0.9
SMN2-213ENST00000614240 LCHNA4D1U4 455 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 TGFB3P10600 412 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
SMN2-213ENST00000614240 HSDL1Q3SXM5 330 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 FAM117BQ6P1L5 589 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 IL31RAQ8NI17 732 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 HLA-CQ95604 372 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 RAD9AQ99638 391 aa20.69■□□□□ 0.9
SMN2-213ENST00000614240 TRIP12Q14669 1992 aaPredicted RBP20.68■□□□□ 0.9
SMN2-213ENST00000614240 UBA1P22314 1058 aaKnown RBP20.68■□□□□ 0.9
SMN2-213ENST00000614240 THPOP40225 353 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 SP2Q02086 613 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 WTAPQ15007 396 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 TTC22Q5TAA0 569 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 SPRED2Q7Z698 418 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 MTUS1Q9ULD2 1270 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 KIAA1217Q5T5P2 1943 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 TET1Q8NFU7 2136 aa20.68■□□□□ 0.9
SMN2-213ENST00000614240 PRRC2BQ5JSZ5 2229 aaKnown RBP20.68■□□□□ 0.9
SMN2-213ENST00000614240 MYH6P13533 1939 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 PNMA6FA0A0J9YX94 578 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 C17orf102A2RUQ5 167 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 NOP56O00567 594 aaKnown RBP20.67■□□□□ 0.9
SMN2-213ENST00000614240 LGR5O75473 907 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 GJB5O95377 273 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 HOXD8P13378 290 aaPredicted RBP20.67■□□□□ 0.9
SMN2-213ENST00000614240 TCTN1Q2MV58 587 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 TRIM71Q2Q1W2 868 aaKnown RBP20.67■□□□□ 0.9
SMN2-213ENST00000614240 GDPD5Q8WTR4 605 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 PIBF1Q8WXW3 757 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 WNT8BQ93098 351 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 RIOX1Q9H6W3 641 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 EMSYQ7Z589 1322 aa20.67■□□□□ 0.9
SMN2-213ENST00000614240 RSPH10B2B2RC85 870 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 CYP21A2P08686 494 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 RSPH10BP0C881 870 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 GNPTABQ3T906 1256 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 CATIPQ7Z7H3 387 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 NCOA7Q8NI08 942 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 GPKOWQ92917 476 aaPredicted RBP eCLIP20.66■□□□□ 0.9
SMN2-213ENST00000614240 ATP6V0A1Q93050 837 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 TGS1Q96RS0 853 aaKnown RBP20.66■□□□□ 0.9
SMN2-213ENST00000614240 C16orf70Q9BSU1 422 aa20.66■□□□□ 0.9
SMN2-213ENST00000614240 VCANP13611 3396 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 H3BRB1 525 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 LPXNO60711 386 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 AMHP03971 560 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 GSPT1P15170 499 aaKnown RBP20.65■□□□□ 0.9
SMN2-213ENST00000614240 PTH1RQ03431 593 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 SLC35G1Q2M3R5 365 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 TRAF7Q6Q0C0 670 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 SERINC5Q86VE9 423 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 TUT1Q9H6E5 874 aaKnown RBP20.65■□□□□ 0.9
SMN2-213ENST00000614240 SENP2Q9HC62 589 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 LMCD1Q9NZU5 365 aa20.65■□□□□ 0.9
SMN2-213ENST00000614240 LINC01553A4QN01 128 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 PDE4AP27815 886 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 ERVK-21P61565 698 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 HIC1Q14526 733 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 MBTPS1Q14703 1052 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 MYOCDQ8IZQ8 938 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 RTEL1Q9NZ71 1219 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 INSL6Q9Y581 213 aa20.64■□□□□ 0.89
SMN2-213ENST00000614240 E7EWF7 191 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 CYTH3O43739 400 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 LGALS2P05162 132 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 SMIM10L2AP0DMW4 78 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 SMIM10L2BP0DMW5 78 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 CHMLP26374 656 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 NEDD9Q14511 834 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMN2-213ENST00000614240 DBF4BQ8NFT6 615 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 SMARCC2Q8TAQ2 1214 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 CUL5Q93034 780 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 C1QTNF1Q9BXJ1 281 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
SMN2-213ENST00000614240 SUGCTQ9HAC7 445 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms