RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 ETNPPLQ8TBG4 499 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 MTMR9Q96QG7 549 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 POLR3EQ9NVU0 708 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 MCM3APO60318 1980 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 SYNGAP1Q96PV0 1343 aa13.67□□□□□ -0.22
CLK4-215ENST00000611733 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 FIBPO43427 364 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 ACVR2BQ13705 512 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 GJC2Q5T442 439 aaPredicted RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 AGO4Q9HCK5 861 aaKnown RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 HTTP42858 3142 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 B4DLN1 442 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 ADCY6O43306 1168 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 ADCYAP1R1P41586 468 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 KRT85P78386 507 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 ITGB3BPQ13352 177 aaPredicted RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 CALCRLQ16602 461 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 MSL3Q8N5Y2 521 aaKnown RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 LEO1Q8WVC0 666 aaPredicted RBP13.66□□□□□ -0.22
CLK4-215ENST00000611733 COPS5Q92905 334 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 PTPN22Q9Y2R2 807 aa13.66□□□□□ -0.22
CLK4-215ENST00000611733 LRRC37A2A6NM11 1700 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 STAM2O75886 525 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 TXKP42681 527 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 CENPFP49454 3210 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 ATP2C1P98194 919 aaPredicted RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 STK38Q15208 465 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 CCDC62Q6P9F0 684 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 NIPA1Q7RTP0 329 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 NLRX1Q86UT6 975 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 GPRASP2Q96D09 838 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 CLIC6Q96NY7 704 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 MPHOSPH6Q99547 160 aaKnown RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 ZNF577Q9BSK1 485 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 ABHD16BQ9H3Z7 469 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 CFAP45Q9UL16 551 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 DDX39AO00148 427 aaKnown RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 IPO5O00410 1097 aaKnown RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 KCNA2P16389 499 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 ICAM3P32942 547 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
CLK4-215ENST00000611733 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
CLK4-215ENST00000611733 SPTLC2O15270 562 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 MFSD14CQ5VZR4 134 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 ATL3Q6DD88 541 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
CLK4-215ENST00000611733 PSMD10O75832 226 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 YEATS4O95619 227 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 TXNP10599 105 aaKnown RBP13.64□□□□□ -0.23
CLK4-215ENST00000611733 CYBAP13498 195 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 SMPD1P17405 629 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 CCND3P30281 292 aaPredicted RBP13.64□□□□□ -0.23
CLK4-215ENST00000611733 GRK4P32298 578 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 TECP42680 631 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 IRX5P78411 483 aaPredicted RBP13.64□□□□□ -0.23
CLK4-215ENST00000611733 GNPTABQ3T906 1256 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 SPECC1Q5M775 1068 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 PXYLP1Q8TE99 480 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
CLK4-215ENST00000611733 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
CLK4-215ENST00000611733 PCDHA7Q9UN72 937 aa13.64□□□□□ -0.23
CLK4-215ENST00000611733 TCHHQ07283 1943 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 VWA3AA6NCI4 1184 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 MARCH6O60337 910 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
CLK4-215ENST00000611733 UBA1P22314 1058 aaKnown RBP13.63□□□□□ -0.23
CLK4-215ENST00000611733 CDC25AP30304 524 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 PRMT2P55345 433 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 SETQ01105 290 aaPredicted RBP13.63□□□□□ -0.23
CLK4-215ENST00000611733 CLEC17AQ6ZS10 378 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
CLK4-215ENST00000611733 PP2D1A8MPX8 630 aa13.62□□□□□ -0.23
CLK4-215ENST00000611733 MAFGO15525 162 aa13.62□□□□□ -0.23
CLK4-215ENST00000611733 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
CLK4-215ENST00000611733 HMGCRP04035 888 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms