RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PDCL2Q8N4E4 241 aa31.23■■■□□ 2.59
CSPG5-205ENST00000610462 CHURC1Q8WUH1 139 aa31.23■■■□□ 2.59
CSPG5-205ENST00000610462 NOC4LQ9BVI4 516 aaKnown RBP31.23■■■□□ 2.59
CSPG5-205ENST00000610462 VCPKMTQ9H867 229 aa31.23■■■□□ 2.59
CSPG5-205ENST00000610462 PANK4Q9NVE7 773 aa31.23■■■□□ 2.59
CSPG5-205ENST00000610462 PIM2Q9P1W9 311 aa31.23■■■□□ 2.59
CSPG5-205ENST00000610462 LUC7L2Q9Y383 392 aaKnown RBP31.23■■■□□ 2.59
CSPG5-205ENST00000610462 MED24O75448 989 aa31.22■■■□□ 2.59
CSPG5-205ENST00000610462 TBC1D8BQ0IIM8 1120 aa31.22■■■□□ 2.59
CSPG5-205ENST00000610462 OR8K1Q8NGG5 319 aa31.22■■■□□ 2.59
CSPG5-205ENST00000610462 NUP58Q9BVL2 599 aa31.22■■■□□ 2.59
CSPG5-205ENST00000610462 PGAP2Q9UHJ9 254 aa31.22■■■□□ 2.59
CSPG5-205ENST00000610462 SSBP05455 408 aaKnown RBP eCLIP31.21■■■□□ 2.59
CSPG5-205ENST00000610462 CAP2P40123 477 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 MIGA2Q7L4E1 593 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 WDR24Q96S15 920 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 RANBP17Q9H2T7 1088 aaKnown RBP31.21■■■□□ 2.59
CSPG5-205ENST00000610462 SH2D4AQ9H788 454 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 STK24Q9Y6E0 443 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 PLA2G6O60733 806 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 URI1O94763 535 aaPredicted RBP31.21■■■□□ 2.59
CSPG5-205ENST00000610462 ERMNQ8TAM6 284 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 DNAJC7Q99615 494 aa31.21■■■□□ 2.59
CSPG5-205ENST00000610462 TGFB2P61812 414 aa31.2■■■□□ 2.59
CSPG5-205ENST00000610462 RETREG2Q8NC44 543 aa31.2■■■□□ 2.59
CSPG5-205ENST00000610462 ABCB11O95342 1321 aa31.2■■■□□ 2.59
CSPG5-205ENST00000610462 FER1L6Q2WGJ9 1857 aa31.2■■■□□ 2.59
CSPG5-205ENST00000610462 MAP3K10Q02779 954 aa31.2■■■□□ 2.58
CSPG5-205ENST00000610462 CCDC65Q8IXS2 484 aa31.2■■■□□ 2.58
CSPG5-205ENST00000610462 MYOCDQ8IZQ8 938 aa31.2■■■□□ 2.58
CSPG5-205ENST00000610462 FAM26FQ5R3K3 315 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 NCAPH2Q6IBW4 605 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 GPBP1Q86WP2 473 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 KIFC2Q96AC6 838 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 ERGIC2Q96RQ1 377 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 TSG101Q99816 390 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 TTYH3Q9C0H2 523 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 ATAD5Q96QE3 1844 aa31.19■■■□□ 2.58
CSPG5-205ENST00000610462 WNT10BO00744 389 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 MSH4O15457 936 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 LRRC41Q15345 812 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 CIAPIN1Q6FI81 312 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 FAM160B2Q86V87 743 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 LZTFL1Q9NQ48 299 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.18■■■□□ 2.58
CSPG5-205ENST00000610462 CYP11B2P19099 503 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 RPA1P27694 616 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 ZNF76P36508 570 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 NBPF9Q3BBW0 867 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 FKBP15Q5T1M5 1219 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 CCDC174Q6PII3 467 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 CATSPER3Q86XQ3 398 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 GLIS3Q8NEA6 775 aa31.18■■■□□ 2.58
CSPG5-205ENST00000610462 NOL12Q9UGY1 213 aaKnown RBP eCLIP31.18■■■□□ 2.58
CSPG5-205ENST00000610462 V9GYY5 206 aaPredicted RBP31.18■■■□□ 2.58
CSPG5-205ENST00000610462 SLC12A3P55017 1021 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 ACRBPQ8NEB7 543 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 CGNQ9P2M7 1197 aaKnown RBP31.17■■■□□ 2.58
CSPG5-205ENST00000610462 POTEFA5A3E0 1075 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 RASSF10A6NK89 507 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 POTEIP0CG38 1075 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 TSR1Q2NL82 804 aaKnown RBP31.17■■■□□ 2.58
CSPG5-205ENST00000610462 POTEGQ6S5H5 508 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 POTEEQ6S8J3 1075 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 CHP1Q99653 195 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 MYOZ2Q9NPC6 264 aa31.17■■■□□ 2.58
CSPG5-205ENST00000610462 PITPNM2Q9BZ72 1349 aa31.16■■■□□ 2.58
CSPG5-205ENST00000610462 ZYXQ15942 572 aaKnown RBP31.16■■■□□ 2.58
CSPG5-205ENST00000610462 VWA3BQ502W6 1294 aa31.16■■■□□ 2.58
CSPG5-205ENST00000610462 LRRC55Q6ZSA7 311 aa31.16■■■□□ 2.58
CSPG5-205ENST00000610462 FEM1BQ9UK73 627 aa31.16■■■□□ 2.58
CSPG5-205ENST00000610462 VAV3Q9UKW4 847 aa31.16■■■□□ 2.58
CSPG5-205ENST00000610462 PCDHA2Q9Y5H9 948 aa31.16■■■□□ 2.58
CSPG5-205ENST00000610462 BRCA1P38398 1863 aaKnown RBP31.15■■■□□ 2.58
CSPG5-205ENST00000610462 A0A0U1RQJ8 604 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 GCOM1H8Y6P7 765 aaPredicted RBP31.15■■■□□ 2.58
CSPG5-205ENST00000610462 CFBP00751 764 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 POLR2MP0CAP2 368 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 SPATA31C1P0DKV0 1188 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 TRIM21P19474 475 aaKnown RBP31.15■■■□□ 2.58
CSPG5-205ENST00000610462 MAN2A1Q16706 1144 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 FIGNQ5HY92 759 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 ATRIPQ8WXE1 791 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 MRPL11Q9Y3B7 192 aaKnown RBP31.15■■■□□ 2.58
CSPG5-205ENST00000610462 NKRFO15226 690 aaKnown RBP eCLIP31.15■■■□□ 2.58
CSPG5-205ENST00000610462 ASNSP08243 561 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 ZCWPW2Q504Y3 356 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 DALRD3Q5D0E6 543 aaKnown RBP31.15■■■□□ 2.58
CSPG5-205ENST00000610462 LRRN4CLQ8ND94 238 aa31.15■■■□□ 2.58
CSPG5-205ENST00000610462 IGLV3-22A0A075B6J6 115 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 NPHP3-ACAD11A0A0J9YXS1 232 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 FRMD3A2A2Y4 597 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 KIF5CO60282 957 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 KLK7P49862 253 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 MAP3K9P80192 1104 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 ARSHQ5FYA8 562 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 CYP2W1Q8TAV3 490 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 JDP2Q8WYK2 163 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 TBC1D5Q92609 795 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 IQCDQ96DY2 449 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms