RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CEP68Q76N32 757 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 CABP7Q86V35 215 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 TEX2Q8IWB9 1127 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 SLC26A8Q96RN1 970 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 PHF20Q9BVI0 1012 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 MCOLN1Q9GZU1 580 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 SIGLEC1Q9BZZ2 1709 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZFYVE16Q7Z3T8 1539 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 POGZQ7Z3K3 1410 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 SCAPERQ9BY12 1400 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZC3H12DA2A288 527 aaKnown RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 C22orf46C9J442 243 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 F8W031 263 aaPredicted RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 MSCO60682 206 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 NTRK1P04629 796 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 VIPR1P32241 457 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 MAPKAPK2P49137 400 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 SRSF3P84103 164 aaKnown RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZNF648Q5T619 568 aaPredicted RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 TMEM132EQ6IEE7 984 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 KCNT2Q6UVM3 1135 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 SYDE1Q6ZW31 735 aaPredicted RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZSWIM2Q8NEG5 633 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 KCNN1Q92952 543 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 KISS1RQ969F8 398 aaPredicted RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 TRMT2BQ96GJ1 504 aaKnown RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 CHAMP1Q96JM3 812 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZFYVE21Q9BQ24 234 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 FBXL7Q9UJT9 491 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 MRPS23Q9Y3D9 190 aaKnown RBP5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 X6R8D5 127 aa5.34□□□□□ -1.55
CKS1BP3-201ENST00000600888 REREQ9P2R6 1566 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 ARHGAP5Q13017 1502 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 ZNF518AQ6AHZ1 1483 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 CEP162Q5TB80 1403 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 SETD1BQ9UPS6 1966 aaKnown RBP5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 CCDC163A0A0D9SF12 145 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 TEX51A0A1B0GUA7 166 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 C6orf222P0C671 652 aaPredicted RBP5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 FPR2P25090 351 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 OLFML2BQ68BL8 750 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 WWC2Q6AWC2 1192 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 ZC3H14Q6PJT7 736 aaKnown RBP5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 LBX2Q6XYB7 198 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 NLRP10Q86W26 655 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 Q8N1Y9 231 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 NETO2Q8NC67 525 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 TMEM169Q96HH4 297 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 SLC38A3Q99624 504 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 SIRT5Q9NXA8 310 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 DBR1Q9UK59 544 aaKnown RBP5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 TRAF6Q9Y4K3 522 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 HCFC2Q9Y5Z7 792 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 PTCH2Q9Y6C5 1203 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 HECW2Q9P2P5 1572 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 ABCC1P33527 1531 aa5.33□□□□□ -1.56
CKS1BP3-201ENST00000600888 MLH3Q9UHC1 1453 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 FER1L4A9Z1Z3 1794 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 KIDINS220Q9ULH0 1771 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 H7BY64 318 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 SEMA7AO75326 666 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 TMEM253P0C7T8 217 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 GPR85P60893 370 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 GABREP78334 506 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 PRR5P85299 388 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 PLEKHN1Q494U1 663 aaPredicted RBP5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 MROH9Q5TGP6 573 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 MAMDC2Q7Z304 686 aaPredicted RBP5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 TMC6Q7Z403 805 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 RIOX2Q8IUF8 465 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 IFNL3Q8IZI9 196 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 SH3TC2Q8TF17 1288 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 PEX11GQ96HA9 241 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 SGPP1Q9BX95 441 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 CDIP1Q9H305 208 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 CNTD2Q9H8S5 307 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 KANSL2Q9H9L4 492 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 GCM1Q9NP62 436 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 CLDND1Q9NY35 253 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 MADDQ8WXG6 1647 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 EHBP1L1Q8N3D4 1523 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 GPATCH8Q9UKJ3 1502 aaKnown RBP5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 ATP10AO60312 1499 aa5.32□□□□□ -1.56
CKS1BP3-201ENST00000600888 YEATS2Q9ULM3 1422 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 SUPT6HQ7KZ85 1726 aaKnown RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 SAMD9LQ8IVG5 1584 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 DIP2CQ9Y2E4 1556 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 ETV2O00321 342 aaPredicted RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 KRT1P04264 644 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 DLG4P78352 724 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 SQSTM1Q13501 440 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 BHLHE22Q8NFJ8 381 aaPredicted RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 RNPC3Q96LT9 517 aaKnown RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 PPP1R16BQ96T49 567 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 PPARGC1AQ9UBK2 798 aaKnown RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 NUDT5Q9UKK9 219 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms