RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 HSDL1Q3SXM5 330 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 PPM1EQ8WY54 764 aa17.54■□□□□ 0.4
TGFB1-202ENST00000597453 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
TGFB1-202ENST00000597453 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
TGFB1-202ENST00000597453 PRC1O43663 620 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 ACTN1P12814 892 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 HOXD8P13378 290 aaPredicted RBP17.53■□□□□ 0.4
TGFB1-202ENST00000597453 CCND2P30279 289 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 TRAF1Q13077 416 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 MFSD10Q14728 455 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 KIAA0753Q2KHM9 967 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 CELF3Q5SZQ8 465 aaKnown RBP17.53■□□□□ 0.4
TGFB1-202ENST00000597453 PPP2R2DQ66LE6 453 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 C7orf31Q8N865 590 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 AFAP1L1Q8TED9 768 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 ESYT1Q9BSJ8 1104 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 BCAS3Q9H6U6 928 aa17.53■□□□□ 0.4
TGFB1-202ENST00000597453 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 DDAH1O94760 285 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 RBL2Q08999 1139 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 HIC1Q14526 733 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 LRRC8DQ7L1W4 858 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 CCDC155Q8N6L0 562 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 WNT8BQ93098 351 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 SPATA33Q96N06 139 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 KATNAL1Q9BW62 490 aa17.52■□□□□ 0.4
TGFB1-202ENST00000597453 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
TGFB1-202ENST00000597453 SLC27A2O14975 620 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 TRANK1O15050 2925 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 PPFIA4O75335 1185 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 CDC45O75419 566 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 PLEKHA8P1O95397 391 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 CA3P07451 260 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 SELPP16109 830 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 IGFBP4P22692 258 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 MRPS9P82933 396 aaKnown RBP17.51■□□□□ 0.39
TGFB1-202ENST00000597453 ZNF200P98182 395 aaPredicted RBP17.51■□□□□ 0.39
TGFB1-202ENST00000597453 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
TGFB1-202ENST00000597453 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 MAP3K14Q99558 947 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 SPZ1Q9BXG8 430 aa17.51■□□□□ 0.39
TGFB1-202ENST00000597453 PRRC2BQ5JSZ5 2229 aaKnown RBP17.5■□□□□ 0.39
TGFB1-202ENST00000597453 ARHGEF15O94989 841 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 TGFB3P10600 412 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 CKBP12277 381 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 RXRAP19793 462 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 SEMA3FQ13275 785 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 CCDC85BQ15834 202 aaPredicted RBP17.5■□□□□ 0.39
TGFB1-202ENST00000597453 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 TRIM71Q2Q1W2 868 aaKnown RBP17.5■□□□□ 0.39
TGFB1-202ENST00000597453 TRAF7Q6Q0C0 670 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 CASC1Q6TDU7 716 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 HERC6Q8IVU3 1022 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 RRP36Q96EU6 259 aaKnown RBP17.5■□□□□ 0.39
TGFB1-202ENST00000597453 C16orf70Q9BSU1 422 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 MUC3AQ02505 3323 aa17.5■□□□□ 0.39
TGFB1-202ENST00000597453 REV3LO60673 3130 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 NBNO60934 754 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 BAIAP3O94812 1187 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 KIF5BP33176 963 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 MCM5P33992 734 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 PTK7Q13308 1070 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 USP17L6PQ6QN14 398 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
TGFB1-202ENST00000597453 SRBD1Q8N5C6 995 aaKnown RBP17.49■□□□□ 0.39
TGFB1-202ENST00000597453 PHOSPHO2Q8TCD6 241 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 INPP4AQ96PE3 977 aaPredicted RBP17.49■□□□□ 0.39
TGFB1-202ENST00000597453 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 CERS4Q9HA82 394 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 MLXIPQ9HAP2 919 aa17.49■□□□□ 0.39
TGFB1-202ENST00000597453 RFXAPO00287 272 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 CXCL10P02778 98 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 ICAM3P32942 547 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 WDR5P61964 334 aaKnown RBP17.48■□□□□ 0.39
TGFB1-202ENST00000597453 MBTPS1Q14703 1052 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 GNPTABQ3T906 1256 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 ZNF618Q5T7W0 954 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 TMCO2Q7Z6W1 182 aaPredicted RBP17.48■□□□□ 0.39
TGFB1-202ENST00000597453 TMEM87BQ96K49 555 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 RTEL1Q9NZ71 1219 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 TELO2Q9Y4R8 837 aa17.48■□□□□ 0.39
TGFB1-202ENST00000597453 COL4A4P53420 1690 aaPredicted RBP17.48■□□□□ 0.39
TGFB1-202ENST00000597453 EPOPA6NHQ4 379 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 SPATA31C2B4DYI2 1134 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 MEIS2O14770 477 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 LGALS2P05162 132 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 DEFB103AP81534 67 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 CNKSR3Q6P9H4 555 aa17.47■□□□□ 0.39
TGFB1-202ENST00000597453 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms