RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 GJA10Q969M2 543 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 INPP4AQ96PE3 977 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 VAV3Q9UKW4 847 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 PP2D1A8MPX8 630 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 CA12O43570 354 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 PSMD10O75832 226 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 RGS20O76081 388 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 MAPK4P31152 587 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 CRHR2Q13324 411 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 RBM43Q6ZSC3 357 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 GPR142Q7Z601 462 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 GPRASP2Q96D09 838 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 WDR11Q9BZH6 1224 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 NUP62CLQ9H1M0 184 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 KCNH7Q9NS40 1196 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 PCDHA12Q9UN75 941 aa16.63■□□□□ 0.25
SHKBP1-211ENST00000595945 POTEMA6NI47 508 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 DHX15O43143 795 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ACTN4O43707 911 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 MARCH6O60337 910 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 KINO60870 393 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ALDH1A1P00352 501 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 PGK2P07205 417 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 CDC25AP30304 524 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 SEMA3FQ13275 785 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 GRB14Q14449 540 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 E2F4Q16254 413 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ZNF792Q3KQV3 632 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 B3GNT9Q6UX72 402 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 RIT2Q99578 217 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ANP32EQ9BTT0 268 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 AGO4Q9HCK5 861 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 LRWD1Q9UFC0 647 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
SHKBP1-211ENST00000595945 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 SLC15A5A6NIM6 579 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 SLC26A4O43511 780 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 COBLO75128 1261 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 EIF3JO75822 258 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 ICAM3P32942 547 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 UBA7P41226 1012 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 GRM1Q13255 1194 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 PPP2R5CQ13362 524 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 MTMR1Q13613 665 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 LONRF3Q496Y0 759 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 WDR78Q5VTH9 848 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 KRBA2Q6ZNG9 492 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 CABP7Q86V35 215 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 UIMC1Q96RL1 719 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
SHKBP1-211ENST00000595945 MYH9P35579 1960 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 IPO5O00410 1097 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 MAFGO15525 162 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 ADORA2AP29274 412 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 TXLNAP40222 546 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 ITGB3BPQ13352 177 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 STXBP2Q15833 593 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 HYIQ5T013 277 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 LRCH2Q5VUJ6 765 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 SH3RF1Q7Z6J0 888 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 NLRX1Q86UT6 975 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 CFHR5Q9BXR6 569 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 SERTAD1Q9UHV2 236 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 DIS3Q9Y2L1 958 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
SHKBP1-211ENST00000595945 B4DLN1 442 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 CTAGE5O15320 804 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 GAS7O60861 476 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 MAP2K2P36507 400 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 ZNF445P59923 1031 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 GRB10Q13322 594 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 TMEM119Q4V9L6 283 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 NAALADL2Q58DX5 795 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 MORN1Q5T089 497 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 ZNF467Q7Z7K2 595 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 PDILTQ8N807 584 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 TEKT3Q9BXF9 490 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 PANK2Q9BZ23 570 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 DISC1Q9NRI5 854 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 CCDC39Q9UFE4 941 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms