RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 RXRAP19793 462 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 SP2Q02086 613 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 CCDC85BQ15834 202 aaPredicted RBP15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 CELF3Q5SZQ8 465 aaKnown RBP15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 CASC1Q6TDU7 716 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 VSIG10LQ86VR7 867 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 RAB11FIP4Q86YS3 637 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 CTCFLQ8NI51 663 aaPredicted RBP15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 CAGE1Q8TC20 777 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 AFAP1L1Q8TED9 768 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 ESYT1Q9BSJ8 1104 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 LSG1Q9H089 658 aaKnown RBP15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 PCDHA11Q9Y5I1 949 aa15.61■□□□□ 0.09
CAPNS1-213ENST00000592354 SLC27A2O14975 620 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 PLEKHA8P1O95397 391 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 CA3P07451 260 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 ZNF200P98182 395 aaPredicted RBP15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 TRAF1Q13077 416 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 MYSM1Q5VVJ2 828 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 NFXL1Q6ZNB6 911 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 CMTR1Q8N1G2 835 aaKnown RBP15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 MICALL1Q8N3F8 863 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 SAMD3Q8N6K7 520 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 WNT8BQ93098 351 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 SLC9A7Q96T83 725 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 CERS4Q9HA82 394 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 FRMPD4Q14CM0 1322 aa15.6■□□□□ 0.09
CAPNS1-213ENST00000592354 SPTBN5Q9NRC6 3674 aaKnown RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 HAS3O00219 553 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 SH2B2O14492 632 aaPredicted RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 CKBP12277 381 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 HOXD8P13378 290 aaPredicted RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 SELPP16109 830 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 MRPS9P82933 396 aaKnown RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 HIC1Q14526 733 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 KCNV1Q6PIU1 500 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 TMCO2Q7Z6W1 182 aaPredicted RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 RRP36Q96EU6 259 aaKnown RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 SPZ1Q9BXG8 430 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 LRRC2Q9BYS8 371 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 BCAS3Q9H6U6 928 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 MLXIPQ9HAP2 919 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 ANO2Q9NQ90 1003 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 SEC63Q9UGP8 760 aaKnown RBP15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 CHD7Q9P2D1 2997 aa15.59■□□□□ 0.09
CAPNS1-213ENST00000592354 CCDC69A6NI79 296 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 ARHGEF15O94989 841 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 KIF5BP33176 963 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 MCM5P33992 734 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 GPNMBQ14956 572 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 GNPTABQ3T906 1256 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 USP17L6PQ6QN14 398 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 HERC6Q8IVU3 1022 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 SMARCC2Q8TAQ2 1214 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 RTEL1Q9NZ71 1219 aa15.58■□□□□ 0.08
CAPNS1-213ENST00000592354 hCG_1642624A0A1W2PR95 340 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 RFXAPO00287 272 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 NBNO60934 754 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 BAIAP3O94812 1187 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 KCNJ6P48051 423 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 WDR5P61964 334 aaKnown RBP15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 DEFB103AP81534 67 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 SP4Q02446 784 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 RBL2Q08999 1139 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 SEMA3FQ13275 785 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 PTK7Q13308 1070 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 CREB3L3Q68CJ9 461 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 SRBD1Q8N5C6 995 aaKnown RBP15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 TMEM87BQ96K49 555 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 C16orf70Q9BSU1 422 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 TELO2Q9Y4R8 837 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 SIP14410 1827 aa15.57■□□□□ 0.08
CAPNS1-213ENST00000592354 MICAL3Q7RTP6 2002 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 EPOPA6NHQ4 379 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 NOP56O00567 594 aaKnown RBP15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 PPFIA4O75335 1185 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 LGALS2P05162 132 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 TGFB3P10600 412 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 TRIM71Q2Q1W2 868 aaKnown RBP15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 ZNF618Q5T7W0 954 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 CNKSR3Q6P9H4 555 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 TRAF7Q6Q0C0 670 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 SPRED2Q7Z698 418 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 MICU3Q86XE3 530 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 TRIM50Q86XT4 487 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 CUL5Q93034 780 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 INPP4AQ96PE3 977 aaPredicted RBP15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 MAP3K14Q99558 947 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 THEGQ9P2T0 379 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 MYO9BQ13459 2157 aa15.56■□□□□ 0.08
CAPNS1-213ENST00000592354 MEIS2O14770 477 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 FIBPO43427 364 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 TLL1O43897 1013 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 TAP1Q03518 808 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 MBTPS1Q14703 1052 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 NECTIN1Q15223 517 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 UBE2SQ16763 222 aa15.55■□□□□ 0.08
CAPNS1-213ENST00000592354 TJAP1Q5JTD0 557 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms