RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 AP5M1Q9H0R1 490 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 GNEQ9Y223 722 aaKnown RBP21.78■■□□□ 1.08
DDX39A-214ENST00000590556 FAM86B1E9PN63 330 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 MAFGO15525 162 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 EDIL3O43854 480 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 FAM86B2P0C5J1 330 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 SYT1P21579 422 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 U2AF2P26368 475 aaKnown RBP eCLIP21.77■■□□□ 1.087e-10■□□□□ 9.5
DDX39A-214ENST00000590556 SEMA3FQ13275 785 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 PLA2G4DQ86XP0 818 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 NOSTRINQ8IVI9 506 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 CRISPLD2Q9H0B8 497 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 SPC25Q9HBM1 224 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 Q9Y3F1 56 aa21.77■■□□□ 1.08
DDX39A-214ENST00000590556 FRMPD3Q5JV73 1810 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 POTEFA5A3E0 1075 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 VPS37CA5D8V6 355 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-214ENST00000590556 KIF28PB7ZC32 967 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 DYNC1LI2O43237 492 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-214ENST00000590556 GH1P01241 217 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 MYCNP04198 464 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-214ENST00000590556 PTGS1P23219 599 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 LETM2Q2VYF4 491 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 PRR16Q569H4 304 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 TLK2Q86UE8 772 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 COPS5Q92905 334 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 KCNH7Q9NS40 1196 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 OGDHLQ9ULD0 1010 aa21.76■■□□□ 1.07
DDX39A-214ENST00000590556 IGLV3-22A0A075B6J6 115 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 PGK1P00558 417 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 ARP10275 920 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 CAPN2P17655 700 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 UBA1P22314 1058 aaKnown RBP21.75■■□□□ 1.07
DDX39A-214ENST00000590556 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
DDX39A-214ENST00000590556 GJA9P57773 515 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 SP2Q02086 613 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 MOXD1Q6UVY6 613 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 ARRDC4Q8NCT1 418 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 OR6J1Q8NGC5 347 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 NAP1L4Q99733 375 aaKnown RBP21.75■■□□□ 1.07
DDX39A-214ENST00000590556 UPF3AQ9H1J1 476 aaKnown RBP21.75■■□□□ 1.07
DDX39A-214ENST00000590556 SYNRGQ9UMZ2 1314 aa21.75■■□□□ 1.07
DDX39A-214ENST00000590556 CYP3A7-CYP3A51PA0A087WV96 503 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 TDP2O95551 362 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 GGPS1O95749 300 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 C6orf222P0C671 652 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-214ENST00000590556 CYP3A7P24462 503 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 SETQ01105 290 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-214ENST00000590556 NEDD9Q14511 834 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 RNF180Q86T96 592 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 DHX37Q8IY37 1157 aaKnown RBP21.74■■□□□ 1.07
DDX39A-214ENST00000590556 SENP7Q9BQF6 1050 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 PKD2L1Q9P0L9 805 aa21.74■■□□□ 1.07
DDX39A-214ENST00000590556 STX6O43752 255 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 SORBS3O60504 671 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 CCNT1O60563 726 aaKnown RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 ADAMTS4O75173 837 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 GCFC2P16383 781 aaKnown RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 EN2P19622 333 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 SOX10P56693 466 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 ARHGAP1Q07960 439 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 LAMC2Q13753 1193 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 Q4G0T1 1027 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 CELF3Q5SZQ8 465 aaKnown RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 PPP4R3AQ6IN85 833 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 GIMAP8Q8ND71 665 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 MLXIPQ9HAP2 919 aa21.73■■□□□ 1.07
DDX39A-214ENST00000590556 AGO4Q9HCK5 861 aaKnown RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 DDX25Q9UHL0 483 aaKnown RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 NOL7Q9UMY1 257 aaKnown RBP21.73■■□□□ 1.07
DDX39A-214ENST00000590556 ATP9AO75110 1047 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 KCNA2P16389 499 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 ATP2B1P20020 1258 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 LRRC41Q15345 812 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 MYSM1Q5VVJ2 828 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 CYFIP1Q7L576 1253 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 LENG9Q96B70 501 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 MBOAT7Q96N66 472 aa21.72■■□□□ 1.07
DDX39A-214ENST00000590556 MYADML2A6NDP7 307 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 PDIA4P13667 645 aaKnown RBP21.71■■□□□ 1.07
DDX39A-214ENST00000590556 NKX3-2P78367 333 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 IRX5P78411 483 aaPredicted RBP21.71■■□□□ 1.07
DDX39A-214ENST00000590556 BEX3Q00994 111 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 FSCN1Q16658 493 aaKnown RBP21.71■■□□□ 1.07
DDX39A-214ENST00000590556 BRDTQ58F21 947 aaPredicted RBP21.71■■□□□ 1.07
DDX39A-214ENST00000590556 GNASQ5JWF2 1037 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 ANKLE1Q8NAG6 615 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 KLHDC9Q8NEP7 349 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 EMID1Q96A84 441 aaPredicted RBP21.71■■□□□ 1.07
DDX39A-214ENST00000590556 SPATA33Q96N06 139 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 UIMC1Q96RL1 719 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 SDF4Q9BRK5 362 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 ZNF577Q9BSK1 485 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 BCAS3Q9H6U6 928 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 MTMR6Q9Y217 621 aa21.71■■□□□ 1.07
DDX39A-214ENST00000590556 KBTBD13C9JR72 458 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 IPO5O00410 1097 aaKnown RBP21.7■■□□□ 1.06
DDX39A-214ENST00000590556 DNM1LO00429 736 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 CTAGE5O15320 804 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 MSH4O15457 936 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms