RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ZPR1O75312 459 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 PDHBP11177 359 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 IL1R1P14778 569 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 BTDP43251 543 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 IRAK1P51617 712 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 KCNMA1Q12791 1236 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 NAB2Q15742 525 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 SLC9C1Q4G0N8 1177 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 NFRKBQ6P4R8 1299 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 GSPT2Q8IYD1 628 aaKnown RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 PPM1EQ8WY54 764 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 RIN2Q8WYP3 895 aaPredicted RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 DDX12PQ92771 950 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 HPS3Q969F9 1004 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 DNAJC19Q96DA6 116 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 EEF2KMTQ96G04 330 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 BIN2Q9UBW5 565 aaPredicted RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 RSPH14Q9UHP6 348 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 PCDHGC5Q9Y5F6 944 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 FOCADQ5VW36 1801 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 ATXN2Q99700 1313 aaKnown RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 IGKV6D-41A0A0C4DH26 115 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 SLC37A4O43826 429 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 CLK2P49760 499 aaKnown RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 RHBDL3P58872 404 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 EZH2Q15910 746 aaKnown RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 GRIK5Q16478 980 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 SLC4A8Q2Y0W8 1093 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 CACNA2D4Q7Z3S7 1137 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 CD302Q8IX05 232 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 IFT20Q8IY31 132 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 HDAC7Q8WUI4 952 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 ANKIB1Q9P2G1 1089 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 SAP30BPQ9UHR5 308 aaKnown RBP13.68□□□□□ -0.22
PDE4A-207ENST00000590407 MYH10P35580 1976 aa13.68□□□□□ -0.22
PDE4A-207ENST00000590407 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDE4A-207ENST00000590407 ZEB2O60315 1214 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 HSF2BPO75031 334 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 NOL4O94818 638 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 COASYQ13057 564 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 C10orf76Q5T2E6 689 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 SFMBT2Q5VUG0 894 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 PPP4R3CPQ6ZMV5 832 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
PDE4A-207ENST00000590407 SALL4Q9UJQ4 1053 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 JAG2Q9Y219 1238 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
PDE4A-207ENST00000590407 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 ANXA13P27216 316 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 SLC1A4P43007 532 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 PAK2Q13177 524 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 SLC18A3Q16572 532 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 FAM26FQ5R3K3 315 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 GLT8D2Q9H1C3 349 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
PDE4A-207ENST00000590407 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 GRIN2DO15399 1336 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
PDE4A-207ENST00000590407 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 SRRM3A6NNA2 597 aaPredicted RBP13.66□□□□□ -0.22
PDE4A-207ENST00000590407 TLR2O60603 784 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 TDP2O95551 362 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 ATP2B4P23634 1241 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
PDE4A-207ENST00000590407 GABPAQ06546 454 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 EDRF1Q3B7T1 1238 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 TBC1D22AQ8WUA7 517 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
PDE4A-207ENST00000590407 CD209Q9NNX6 404 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 RBM12Q9NTZ6 932 aaKnown RBP13.66□□□□□ -0.22
PDE4A-207ENST00000590407 PCDHA2Q9Y5H9 948 aa13.66□□□□□ -0.22
PDE4A-207ENST00000590407 FRMD3A2A2Y4 597 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 MYBP10242 640 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 RASSF7Q02833 373 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 MEI1Q5TIA1 1274 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 KCNK18Q7Z418 384 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
PDE4A-207ENST00000590407 TSEN2Q8NCE0 465 aaKnown RBP13.65□□□□□ -0.22
PDE4A-207ENST00000590407 WHAMMQ8TF30 809 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms