RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PAGE5Q96GU1 130 aa10.62□□□□□ -0.71
VPS25-205ENST00000590339 CCDC34Q96HJ3 373 aa10.62□□□□□ -0.71
VPS25-205ENST00000590339 MTMR9Q96QG7 549 aa10.62□□□□□ -0.71
VPS25-205ENST00000590339 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
VPS25-205ENST00000590339 HOXC10Q9NYD6 342 aa10.62□□□□□ -0.71
VPS25-205ENST00000590339 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
VPS25-205ENST00000590339 PCDHA1Q9Y5I3 950 aa10.62□□□□□ -0.71
VPS25-205ENST00000590339 SPDYE16A6NNV3 312 aaPredicted RBP10.61□□□□□ -0.71
VPS25-205ENST00000590339 ESPNB1AK53 854 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 GOLGA6L19H0YKK7 550 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 MEIS2O14770 477 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 OPLAHO14841 1288 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 GTPBP6O43824 516 aaPredicted RBP10.61□□□□□ -0.71
VPS25-205ENST00000590339 SLC37A4O43826 429 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 CCNT1O60563 726 aaKnown RBP10.61□□□□□ -0.71
VPS25-205ENST00000590339 FLOT1O75955 427 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 SGPL1O95470 568 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 TDP2O95551 362 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 TXLNAP40222 546 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 FXR2P51116 673 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS25-205ENST00000590339 CCNA1P78396 465 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 NAALADL2Q58DX5 795 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 PRPF38BQ5VTL8 546 aaKnown RBP10.61□□□□□ -0.71
VPS25-205ENST00000590339 MOXD1Q6UVY6 613 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 FAM160B2Q86V87 743 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 ZSCAN30Q86W11 494 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 IGSF22Q8N9C0 903 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 IQUBQ8NA54 791 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 TRIB2Q92519 343 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 DPF3Q92784 378 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 SMARCE1Q969G3 411 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 MRFAP1L1Q96HT8 127 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 NAP1L4Q99733 375 aaKnown RBP10.61□□□□□ -0.71
VPS25-205ENST00000590339 ANO3Q9BYT9 981 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 HSD3B7Q9H2F3 369 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 PSTPIP2Q9H939 334 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 MAGEF1Q9HAY2 307 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 DISC1Q9NRI5 854 aa10.61□□□□□ -0.71
VPS25-205ENST00000590339 PTPRFP10586 1907 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 CYP3A7-CYP3A51PA0A087WV96 503 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 PP2D1A8MPX8 630 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 BECN2A8MW95 431 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 SMC2O95347 1197 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 HMGCRP04035 888 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 CYP3A7P24462 503 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 DSG3P32926 999 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 TRAF1Q13077 416 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 CCL14Q16627 93 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
VPS25-205ENST00000590339 LBX2Q6XYB7 198 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 MLKLQ8NB16 471 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 SOCS4Q8WXH5 440 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 LPAR1Q92633 364 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 ATG4CQ96DT6 458 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 MTRQ99707 1265 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS25-205ENST00000590339 CUEDC2Q9H467 287 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
VPS25-205ENST00000590339 RRAGDQ9NQL2 400 aaPredicted RBP10.6□□□□□ -0.71
VPS25-205ENST00000590339 FBXO28Q9NVF7 368 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
VPS25-205ENST00000590339 A0A0G2JMZ2 1700 aa10.6□□□□□ -0.71
VPS25-205ENST00000590339 SMTNL1A8MU46 457 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 WDR46O15213 610 aaKnown RBP10.59□□□□□ -0.71
VPS25-205ENST00000590339 SREBF1P36956 1147 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 RGS2P41220 211 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 SNAP25P60880 206 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 MYL5Q02045 173 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 KARSQ15046 597 aaKnown RBP10.59□□□□□ -0.71
VPS25-205ENST00000590339 CALCRLQ16602 461 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 MORN1Q5T089 497 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 USP17L6PQ6QN14 398 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 CABP7Q86V35 215 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 NCAPG2Q86XI2 1143 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 LRRC15Q8TF66 581 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 CHURC1Q8WUH1 139 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 MMTAG2Q9BU76 263 aaKnown RBP10.59□□□□□ -0.71
VPS25-205ENST00000590339 MOV10L1Q9BXT6 1211 aaKnown RBP10.59□□□□□ -0.71
VPS25-205ENST00000590339 DACH1Q9UI36 760 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 FEM1BQ9UK73 627 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 ZKSCAN5Q9Y2L8 839 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 IVNS1ABPQ9Y6Y0 642 aa10.59□□□□□ -0.71
VPS25-205ENST00000590339 RPTORQ8N122 1335 aa10.58□□□□□ -0.71
VPS25-205ENST00000590339 SLC26A4O43511 780 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 MYL1P05976 194 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 XRCC5P13010 732 aaKnown RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
VPS25-205ENST00000590339 ERCC3P19447 782 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 UBA7P41226 1012 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 STAT6P42226 847 aa10.58□□□□□ -0.72
VPS25-205ENST00000590339 USP11P51784 963 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms