RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 SLC30A4O14863 429 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 SGSM2O43147 1006 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 BAG3O95817 575 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 GLP2RO95838 553 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 SP9P0CG40 484 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 KCNA4P22459 653 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 MCCP23508 829 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 PURAQ00577 322 aaKnown RBP13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 PTPN11Q06124 597 aaPredicted RBP13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 FGD4Q96M96 766 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 MTG1Q9BT17 334 aaPredicted RBP13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 RWDD3Q9Y3V2 267 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
CAPNS1-209ENST00000590049 MAGEB6P1A0A0J9YX57 407 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 C1QTNF9BB2RNN3 333 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 VWA5AO00534 786 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 C1QTNF9P0C862 333 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 BMPR1AP36894 532 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 NETO1Q8TDF5 533 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 MICAL3Q7RTP6 2002 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 FANCMQ8IYD8 2048 aa13.57□□□□□ -0.24
CAPNS1-209ENST00000590049 DSPP15924 2871 aaKnown RBP13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 GPAA1O43292 621 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 MYL3P08590 195 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 GNAT2P19087 354 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 GUCY1A2P33402 732 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 NRIP1P48552 1158 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 SEPT2Q15019 361 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 SOWAHCQ53LP3 525 aaPredicted RBP13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 SPICE1Q8N0Z3 855 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 TRIP12Q14669 1992 aaPredicted RBP13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 CNOT1A5YKK6 2376 aaKnown RBP13.56□□□□□ -0.24
CAPNS1-209ENST00000590049 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 SRRM3A6NNA2 597 aaPredicted RBP13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 M0R2C6 588 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 MBD4O95243 580 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 APPP05067 770 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 PTGISQ16647 500 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 IQSEC1Q6DN90 963 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 MIGA1Q8NAN2 632 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 TEX13BQ9BXU2 312 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 PUS7LQ9H0K6 701 aaKnown RBP13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
CAPNS1-209ENST00000590049 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 CHGBP05060 677 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 RBL2Q08999 1139 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 CAMK1Q14012 370 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 SLFNL1Q499Z3 407 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 N4BP2L1Q5TBK1 243 aaPredicted RBP13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 ANKRD35Q8N283 1001 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 REPS2Q8NFH8 660 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 EHD4Q9H223 541 aa13.54□□□□□ -0.24
CAPNS1-209ENST00000590049 TMEM8BA6NDV4 472 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 SPTLC1O15269 473 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 LGR5O75473 907 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 ASGR2P07307 311 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 TGM1P22735 817 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 CPT1AP50416 773 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 RNF20Q5VTR2 975 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 RBM23Q86U06 439 aaKnown RBP13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 DSCC1Q9BVC3 393 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 SLC4A4Q9Y6R1 1079 aa13.53□□□□□ -0.24
CAPNS1-209ENST00000590049 SCN10AQ9Y5Y9 1956 aa13.52□□□□□ -0.24
CAPNS1-209ENST00000590049 C2CD4DB7Z1M9 353 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 UPP2O95045 317 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 SEC24BO95487 1268 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 CKBP12277 381 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 USP5P45974 858 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 PPP4CP60510 307 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 AMOTL1Q8IY63 956 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 LCORLQ8N3X6 602 aa13.52□□□□□ -0.25
CAPNS1-209ENST00000590049 NEK1Q96PY6 1258 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms