RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 CELF3Q5SZQ8 465 aaKnown RBP18.8■□□□□ 0.6
DNMT1-221ENST00000589538 SLC43A3Q8NBI5 491 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 IL27Q8NEV9 243 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 AFG1LQ8WV93 481 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 GPRASP2Q96D09 838 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 LBHD1Q9BQE6 289 aaPredicted RBP18.8■□□□□ 0.6
DNMT1-221ENST00000589538 TPCN1Q9ULQ1 816 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 MYH7BA7E2Y1 1941 aa18.8■□□□□ 0.6
DNMT1-221ENST00000589538 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 MAFGO15525 162 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 MMP3P08254 477 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 SYN1P17600 705 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 CLK2P49760 499 aaKnown RBP18.79■□□□□ 0.6
DNMT1-221ENST00000589538 GIMAP8Q8ND71 665 aaPredicted RBP18.79■□□□□ 0.6
DNMT1-221ENST00000589538 SENP7Q9BQF6 1050 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 MLXIPQ9HAP2 919 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 PDLIM7Q9NR12 457 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 RTEL1Q9NZ71 1219 aa18.79■□□□□ 0.6
DNMT1-221ENST00000589538 GGPS1O95749 300 aa18.78■□□□□ 0.6
DNMT1-221ENST00000589538 UBA1P22314 1058 aaKnown RBP18.78■□□□□ 0.6
DNMT1-221ENST00000589538 BMP8BP34820 402 aa18.78■□□□□ 0.6
DNMT1-221ENST00000589538 SCRN1Q12765 414 aa18.78■□□□□ 0.6
DNMT1-221ENST00000589538 MYSM1Q5VVJ2 828 aa18.78■□□□□ 0.6
DNMT1-221ENST00000589538 CHRDL2Q6WN34 429 aa18.78■□□□□ 0.6
DNMT1-221ENST00000589538 REXO1Q8N1G1 1221 aaKnown RBP18.78■□□□□ 0.6
DNMT1-221ENST00000589538 ANO3Q9BYT9 981 aa18.78■□□□□ 0.6
DNMT1-221ENST00000589538 PRDM5Q9NQX1 630 aaPredicted RBP18.78■□□□□ 0.6
DNMT1-221ENST00000589538 STK36Q9NRP7 1315 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 A0A1W2PPC1 479 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 XBP1P17861 261 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 SREBF1P36956 1147 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 MAGEA10P43363 369 aaPredicted RBP18.77■□□□□ 0.6
DNMT1-221ENST00000589538 RBM25P49756 843 aaKnown RBP18.77■□□□□ 0.6
DNMT1-221ENST00000589538 NFRKBQ6P4R8 1299 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 METTL7BQ6UX53 244 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 SPATA33Q96N06 139 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 GDF15Q99988 308 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 KATNAL1Q9BW62 490 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 TMEM39AQ9NV64 488 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 COLQQ9Y215 455 aaPredicted RBP18.77■□□□□ 0.6
DNMT1-221ENST00000589538 UBIAD1Q9Y5Z9 338 aa18.77■□□□□ 0.6
DNMT1-221ENST00000589538 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.59
DNMT1-221ENST00000589538 KIAA0355O15063 1070 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 HOXD8P13378 290 aaPredicted RBP18.76■□□□□ 0.59
DNMT1-221ENST00000589538 NLRP5P59047 1200 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 SP2Q02086 613 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 PTPN11Q06124 597 aaPredicted RBP18.76■□□□□ 0.59
DNMT1-221ENST00000589538 FAAP100Q0VG06 881 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 MTMR1Q13613 665 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 GALNT17Q6IS24 598 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 FAM126BQ8IXS8 530 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 WASF1Q92558 559 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 ZFP91Q96JP5 570 aaPredicted RBP18.76■□□□□ 0.59
DNMT1-221ENST00000589538 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 VPS54Q9P1Q0 977 aa18.76■□□□□ 0.59
DNMT1-221ENST00000589538 NOP56O00567 594 aaKnown RBP18.75■□□□□ 0.59
DNMT1-221ENST00000589538 SUPT20HL2P0C7V6 817 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 ITGB5P18084 799 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 PSMC6P62333 389 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 SEMA3FQ13275 785 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 JAKMIP3Q5VZ66 844 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 NIPA1Q7RTP0 329 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 PRO3102Q9H379 93 aa18.75■□□□□ 0.59
DNMT1-221ENST00000589538 GRIN2DO15399 1336 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 LTBP2Q14767 1821 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 CD4P01730 458 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 RAG1P15918 1043 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 ARHGAP4P98171 946 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 NBPF20Q3BBV1 942 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 CEP55Q53EZ4 464 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
DNMT1-221ENST00000589538 UBE2OQ9C0C9 1292 aaKnown RBP18.74■□□□□ 0.59
DNMT1-221ENST00000589538 TMEM260Q9NX78 707 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 LIMCH1Q9UPQ0 1083 aa18.74■□□□□ 0.59
DNMT1-221ENST00000589538 CYP3A4P08684 503 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 ZNF76P36508 570 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 MDM2Q00987 491 aaPredicted RBP18.73■□□□□ 0.59
DNMT1-221ENST00000589538 ME3Q16798 604 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 HSDL1Q3SXM5 330 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
DNMT1-221ENST00000589538 CYFIP1Q7L576 1253 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 SH3RF1Q7Z6J0 888 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 PGBD1Q96JS3 809 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 TBX21Q9UL17 535 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 PCDHA4Q9UN74 947 aa18.73■□□□□ 0.59
DNMT1-221ENST00000589538 F2P00734 622 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 TIMP1P01033 207 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 KCNA2P16389 499 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 RABEP1Q15276 862 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 DAGLBQ8NCG7 672 aa18.72■□□□□ 0.59
DNMT1-221ENST00000589538 ZSCAN31Q96LW9 406 aaPredicted RBP18.72■□□□□ 0.59
DNMT1-221ENST00000589538 ORC3Q9UBD5 711 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms