RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PLA2G4BP0C869 781 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 BCRP11274 1271 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 LMNB1P20700 586 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 HSD17B4P51659 736 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 EHHADHQ08426 723 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 STK4Q13043 487 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 CSGALNACT2Q8N6G5 542 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 SYT2Q8N9I0 419 aaPredicted RBP11.58□□□□□ -0.56
VPS25-203ENST00000589520 MYRIPQ8NFW9 859 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 NEK9Q8TD19 979 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 DDX12PQ92771 950 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 LENG9Q96B70 501 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 SRRTQ9BXP5 876 aaKnown RBP11.58□□□□□ -0.56
VPS25-203ENST00000589520 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 ARFGEF1Q9Y6D6 1849 aa11.58□□□□□ -0.56
VPS25-203ENST00000589520 FAM86B1E9PN63 330 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 GNA14O95837 355 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 FAM86B2P0C5J1 330 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.565e-6■■■□□ 14.9
VPS25-203ENST00000589520 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS25-203ENST00000589520 OAZ1P54368 228 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 SNAP25P60880 206 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 SPIRE1Q08AE8 756 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
VPS25-203ENST00000589520 XRRA1Q6P2D8 792 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 SAMD7Q7Z3H4 446 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 TMTC1Q8IUR5 882 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 TC2NQ8N9U0 490 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 LRRC15Q8TF66 581 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 SLC5A5Q92911 643 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 C12orf42Q96LP6 360 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 RIT2Q99578 217 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 PANK4Q9NVE7 773 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 KCND2Q9NZV8 630 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 CCPG1Q9ULG6 757 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
VPS25-203ENST00000589520 BRCA1P38398 1863 aaKnown RBP11.57□□□□□ -0.56
VPS25-203ENST00000589520 IGLV3-22A0A075B6J6 115 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 FRMD3A2A2Y4 597 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 LGALS16A8MUM7 142 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 MEIS1O00470 390 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 DYNC1I1O14576 645 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 TEX33O43247 280 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 KRT18P05783 430 aaKnown RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 IDEP14735 1019 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 HOXA13P31271 388 aaPredicted RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 BACE1P56817 501 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 UBXN1Q04323 297 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 EPHA7Q15375 998 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 TKFCQ3LXA3 575 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 TBC1D10BQ4KMP7 808 aaPredicted RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 FAM26FQ5R3K3 315 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 NOL9Q5SY16 702 aaKnown RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 FKBP15Q5T1M5 1219 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 E4F1Q66K89 784 aaPredicted RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 ARHGAP27Q6ZUM4 889 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 OTOP1Q7RTM1 612 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 CATSPER3Q86XQ3 398 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 MYOCDQ8IZQ8 938 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 C17orf53Q8N3J3 647 aaPredicted RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 MB21D1Q8N884 522 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 KIF18AQ8NI77 898 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 DNAJC19Q96DA6 116 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 DUSP9Q99956 384 aaKnown RBP11.56□□□□□ -0.56
VPS25-203ENST00000589520 MXRA8Q9BRK3 442 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 MAPK8IP1Q9UQF2 711 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 MYPNQ86TC9 1320 aa11.56□□□□□ -0.56
VPS25-203ENST00000589520 MAFGO15525 162 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 MED24O75448 989 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 PSMD10O75832 226 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 EYA4O95677 639 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 FCER1AP12319 257 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 GAP43P17677 238 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 CYP11B2P19099 503 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 FECHP22830 423 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 INPP5BP32019 993 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 SLC12A3P55017 1021 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 FKBP3Q00688 224 aaKnown RBP11.55□□□□□ -0.56
VPS25-203ENST00000589520 RASSF7Q02833 373 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 RBL2Q08999 1139 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 COASYQ13057 564 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 ZYXQ15942 572 aaKnown RBP11.55□□□□□ -0.56
VPS25-203ENST00000589520 HSP90AA4PQ58FG1 418 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 FIGNQ5HY92 759 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 NBPF12Q5TAG4 269 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms