RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CTAGE1Q96RT6 745 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 UHRF1Q96T88 793 aaPredicted RBP15.9■□□□□ 0.14
HDAC5-208ENST00000588419 MAF1Q9H063 256 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 SENP2Q9HC62 589 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
HDAC5-208ENST00000588419 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
HDAC5-208ENST00000588419 CHD7Q9P2D1 2997 aa15.9■□□□□ 0.14
HDAC5-208ENST00000588419 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
HDAC5-208ENST00000588419 GCOM1H8Y6P7 765 aaPredicted RBP15.89■□□□□ 0.13
HDAC5-208ENST00000588419 CYP21A2P08686 494 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 POLR2MP0CAP2 368 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 CKBP12277 381 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 UBA1P22314 1058 aaKnown RBP15.89■□□□□ 0.13
HDAC5-208ENST00000588419 CCND2P30279 289 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 DEFB103AP81534 67 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 TFF2Q03403 129 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 TAP1Q03518 808 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 CNKSR3Q6P9H4 555 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 SPRED2Q7Z698 418 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 PHOSPHO2Q8TCD6 241 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
HDAC5-208ENST00000588419 MTUS1Q9ULD2 1270 aa15.89■□□□□ 0.13
HDAC5-208ENST00000588419 LCHNA4D1U4 455 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 NBNO60934 754 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 RGS20O76081 388 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 F2P00734 622 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
HDAC5-208ENST00000588419 HSDL1Q3SXM5 330 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 NCOA7Q8NI08 942 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 WNT8BQ93098 351 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 EMID1Q96A84 441 aaPredicted RBP15.88■□□□□ 0.13
HDAC5-208ENST00000588419 MTMR8Q96EF0 704 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 NECAB3Q96P71 396 aaPredicted RBP15.88■□□□□ 0.13
HDAC5-208ENST00000588419 MLXIPQ9HAP2 919 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 MTCH2Q9Y6C9 303 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 TAF6LQ9Y6J9 622 aa15.88■□□□□ 0.13
HDAC5-208ENST00000588419 E7EWF7 191 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 CHMLP26374 656 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 KCNQ1P51787 676 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 PTK7Q13308 1070 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 SLC35G1Q2M3R5 365 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 TCTN1Q2MV58 587 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 CELF3Q5SZQ8 465 aaKnown RBP15.87■□□□□ 0.13
HDAC5-208ENST00000588419 ZNF618Q5T7W0 954 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 CATIPQ7Z7H3 387 aa15.87■□□□□ 0.13
HDAC5-208ENST00000588419 REV3LO60673 3130 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 NOP56O00567 594 aaKnown RBP15.86■□□□□ 0.13
HDAC5-208ENST00000588419 CYTH3O43739 400 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 THPOP40225 353 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 SP2Q02086 613 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 SP4Q02446 784 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 GRB10Q13322 594 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 GPNMBQ14956 572 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 KCNV1Q6PIU1 500 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 STOX1Q6ZVD7 989 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 MYL10Q9BUA6 226 aa15.86■□□□□ 0.13
HDAC5-208ENST00000588419 MAP3K20Q9NYL2 800 aaKnown RBP15.86■□□□□ 0.13
HDAC5-208ENST00000588419 PNMA6FA0A0J9YX94 578 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 C17orf102A2RUQ5 167 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 HAS3O00219 553 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 PARNO95453 639 aaKnown RBP15.85■□□□□ 0.13
HDAC5-208ENST00000588419 CTSHP09668 335 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 GHRHRQ02643 423 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 TRAF1Q13077 416 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 IKBKEQ14164 716 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 HIC1Q14526 733 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 VSIG10LQ86VR7 867 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 RTEL1Q9NZ71 1219 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 LOXHD1Q8IVV2 1947 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 TTC28Q96AY4 2481 aa15.85■□□□□ 0.13
HDAC5-208ENST00000588419 CXCL10P02778 98 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 LGALS2P05162 132 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 RBL2Q08999 1139 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 AAK1Q2M2I8 961 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 TRIM71Q2Q1W2 868 aaKnown RBP15.84■□□□□ 0.13
HDAC5-208ENST00000588419 GNPTABQ3T906 1256 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 NFXL1Q6ZNB6 911 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 CTCFLQ8NI51 663 aaPredicted RBP15.84■□□□□ 0.13
HDAC5-208ENST00000588419 ATP6V0A1Q93050 837 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 BCAS3Q9H6U6 928 aa15.84■□□□□ 0.13
HDAC5-208ENST00000588419 RALGAPA2Q2PPJ7 1873 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 ABHD14A-ACY1A0A1B0GW23 586 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 SGSM2O43147 1006 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 PPFIA4O75335 1185 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 LGR5O75473 907 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 SMIM10L2AP0DMW4 78 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 SMIM10L2BP0DMW5 78 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 ANTXR2P58335 489 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 TROAPQ12815 778 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 MBTPS1Q14703 1052 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 UTP14CQ5TAP6 766 aaKnown RBP15.83■□□□□ 0.12
HDAC5-208ENST00000588419 CASC1Q6TDU7 716 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 CYFIP1Q7L576 1253 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 TRIM50Q86XT4 487 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 RAB11FIP4Q86YS3 637 aa15.83■□□□□ 0.12
HDAC5-208ENST00000588419 ZNF654Q8IZM8 581 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms