RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TTC12Q9H892 705 aaPredicted RBP7□□□□□ -1.29
SMAD4-203ENST00000585448 GP6Q9HCN6 339 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 HOMER3Q9NSC5 361 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 WHRNQ9P202 907 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 RUSC2Q8N2Y8 1516 aa7□□□□□ -1.29
SMAD4-203ENST00000585448 FAM86C2PA6NEL3 165 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 U2SURPO15042 1029 aaKnown RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 KLF4O43474 513 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 ADCY5O95622 1261 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 PNMA6AP0CW24 399 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 ITGB5P18084 799 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 NF2P35240 595 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 MRPL12P52815 198 aaKnown RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 TEKQ02763 1124 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 TMED1Q13445 227 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 TCEAL1Q15170 157 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 NBPF8Q3BBV2 869 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 GNPTABQ3T906 1256 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 FILIP1LQ4L180 1135 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 TDRD10Q5VZ19 366 aaKnown RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 DCAF15Q66K64 600 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 VHLLQ6RSH7 139 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 TMCO3Q6UWJ1 677 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 SMARCE1Q969G3 411 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 ZNF396Q96N95 335 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 BAG1Q99933 345 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 MAF1Q9H063 256 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 SUN2Q9UH99 717 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 MCM8Q9UJA3 840 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 SYNPO2Q9UMS6 1093 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 PCDHA11Q9Y5I1 949 aa6.99□□□□□ -1.29
SMAD4-203ENST00000585448 SOS1Q07889 1333 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-203ENST00000585448 KDRP35968 1356 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 SYCE3A1L190 88 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 WASH4PA8MWX3 477 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 GSNP06396 782 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 NAT2P11245 290 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 ITGA4P13612 1032 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 PECAM1P16284 738 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-203ENST00000585448 LTKP29376 864 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 GDNFP39905 211 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 PEX19P40855 299 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 IRAK1P51617 712 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
SMAD4-203ENST00000585448 EGR3Q06889 387 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 FXNQ16595 210 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 ACRBPQ8NEB7 543 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-203ENST00000585448 RCC1LQ96I51 464 aaKnown RBP6.98□□□□□ -1.29
SMAD4-203ENST00000585448 LZTS2Q9BRK4 669 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 RWDD1Q9H446 243 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-203ENST00000585448 RC3H2Q9HBD1 1191 aaKnown RBP6.98□□□□□ -1.29
SMAD4-203ENST00000585448 GFOD1Q9NXC2 390 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 SUSD2Q9UGT4 822 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 FBXL21Q9UKT6 434 aa6.98□□□□□ -1.29
SMAD4-203ENST00000585448 ANKRD34BA5PLL1 514 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 NEMFO60524 1076 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 ERLIN2O94905 339 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 IGHDP01880 384 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 JUNBP17275 347 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 CHMLP26374 656 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 CTSKP43235 329 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 RASA3Q14644 834 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 NR0B2Q15466 257 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 SDCCAG8Q86SQ7 713 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 WDR63Q8IWG1 891 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 LRRN4CLQ8ND94 238 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 THOC2Q8NI27 1593 aaKnown RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 CTCFLQ8NI51 663 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 DHX38Q92620 1227 aaKnown RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 RMDN2Q96LZ7 410 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 AGAP3Q96P47 875 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 TANGO6Q9C0B7 1094 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 GBP3Q9H0R5 595 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 C19orf73Q9NVV2 129 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 CTNND2Q9UQB3 1225 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 DIS3Q9Y2L1 958 aaKnown RBP6.97□□□□□ -1.29
SMAD4-203ENST00000585448 ZNF451Q9Y4E5 1061 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 SYNRGQ9UMZ2 1314 aa6.97□□□□□ -1.29
SMAD4-203ENST00000585448 ROCK1Q13464 1354 aa6.96□□□□□ -1.29
SMAD4-203ENST00000585448 BIN1O00499 593 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 CHUKO15111 745 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 ZNF205O95201 554 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 FAM163BP0C2L3 166 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 SKILP12757 684 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 HNRNPH1P31943 449 aaKnown RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 NAP1L1P55209 391 aaKnown RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 SLC8A3P57103 927 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 TBC1D25Q3MII6 688 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 HEATR6Q6AI08 1181 aaKnown RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 LSM14AQ8ND56 463 aaKnown RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 BICD2Q8TD16 824 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 MICAL1Q8TDZ2 1067 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 C17orf50Q8WW18 174 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms