RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 METAP2P50579 478 aaKnown RBP eCLIP11.38□□□□□ -0.59
SKA2-208ENST00000583927 FGD1P98174 961 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 PPIGQ13427 754 aaKnown RBP eCLIP11.38□□□□□ -0.59
SKA2-208ENST00000583927 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 FAM109BQ6ICB4 259 aaPredicted RBP11.38□□□□□ -0.59
SKA2-208ENST00000583927 USP17L6PQ6QN14 398 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 Q6ZUG5 572 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 RUFY3Q7L099 469 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
SKA2-208ENST00000583927 TMEM199Q8N511 208 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 KATNAL1Q9BW62 490 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 BARHL2Q9NY43 387 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 CHD7Q9P2D1 2997 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 HAS3O00219 553 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 PITPNM1O00562 1244 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 MAFGO15525 162 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 FIBPO43427 364 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 F2P00734 622 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 FOSP01100 380 aaPredicted RBP11.37□□□□□ -0.59
SKA2-208ENST00000583927 CPA1P15085 419 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 UBA1P22314 1058 aaKnown RBP11.37□□□□□ -0.59
SKA2-208ENST00000583927 ADD1P35611 737 aaKnown RBP11.37□□□□□ -0.59
SKA2-208ENST00000583927 ANAPC15P60006 121 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 PSMC6P62333 389 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 SP2Q02086 613 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 APOBRQ0VD83 1088 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 NEDD9Q14511 834 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 SHHQ15465 462 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 WWC2Q6AWC2 1192 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 RAB11FIP4Q86YS3 637 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 KAT2BQ92831 832 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 BRF1Q92994 677 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 GPRASP2Q96D09 838 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 CDHR1Q96JP9 859 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 NOC4LQ9BVI4 516 aaKnown RBP11.37□□□□□ -0.59
SKA2-208ENST00000583927 TRPV6Q9H1D0 765 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 HIPK3Q9H422 1215 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 RIC8AQ9NPQ8 531 aa11.37□□□□□ -0.59
SKA2-208ENST00000583927 A0A0C4DFX4 3053 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 PRUNE2Q8WUY3 3088 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 STXBP3O00186 592 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 PRPF3O43395 683 aaKnown RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 GGPS1O95749 300 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 CLK2P49760 499 aaKnown RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 SMAD3P84022 425 aaKnown RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 SEMA3FQ13275 785 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 NTRK3Q16288 839 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 PFKFB3Q16875 520 aaPredicted RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 HSDL1Q3SXM5 330 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 C9orf50Q5SZB4 431 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 RASIP1Q5U651 963 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 MCTP2Q6DN12 878 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 PSRC1Q6PGN9 363 aaPredicted RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 METTL7BQ6UX53 244 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 HEATR3Q7Z4Q2 680 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 GIMAP8Q8ND71 665 aaPredicted RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 ZNF274Q96GC6 653 aaPredicted RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 CYP46A1Q9Y6A2 500 aa11.36□□□□□ -0.59
SKA2-208ENST00000583927 V9GY48 417 aaPredicted RBP11.36□□□□□ -0.59
SKA2-208ENST00000583927 PTPRSQ13332 1948 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 hCG_1642624A0A1W2PR95 340 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 SCG2P13521 617 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 IFNAR1P17181 557 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
SKA2-208ENST00000583927 EPHB4P54760 987 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 NAPAP54920 295 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 RBL2Q08999 1139 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 AP3B2Q13367 1082 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 TOB2Q14106 344 aaPredicted RBP11.35□□□□□ -0.59
SKA2-208ENST00000583927 TMEM240Q5SV17 173 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 NLRX1Q86UT6 975 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 FAM177A1Q8N128 213 aaPredicted RBP11.35□□□□□ -0.59
SKA2-208ENST00000583927 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
SKA2-208ENST00000583927 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SKA2-208ENST00000583927 SPATA33Q96N06 139 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 RNF26Q9BY78 433 aaPredicted RBP11.35□□□□□ -0.59
SKA2-208ENST00000583927 ZMYND12Q9H0C1 365 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 IL23AQ9NPF7 189 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 GTF2IRD1Q9UHL9 959 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 PCDHA6Q9UN73 950 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 PCDHA8Q9Y5H6 950 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 UBIAD1Q9Y5Z9 338 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 UNC80Q8N2C7 3258 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 MICAL3Q7RTP6 2002 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
SKA2-208ENST00000583927 TMEM265A0A087WTH1 108 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 SMCO2A6NFE2 343 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
SKA2-208ENST00000583927 PFKMP08237 780 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 CSF2RAP15509 400 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 HOXC8P31273 242 aa11.34□□□□□ -0.59
SKA2-208ENST00000583927 CYP2C18P33260 490 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms