RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 PRKCZQ05513 592 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MTMR1Q13613 665 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CALCRLQ16602 461 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KCNV1Q6PIU1 500 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SLFN12Q8IYM2 578 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ETNPPLQ8TBG4 499 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 HAS1Q92839 578 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SLC5A5Q92911 643 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FERMT2Q96AC1 680 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CDHR1Q96JP9 859 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ABHD16BQ9H3Z7 469 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 VTA1Q9NP79 307 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KCNH7Q9NS40 1196 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FLRT1Q9NZU1 646 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PLXNA1Q9UIW2 1896 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SRPRBQ9Y5M8 271 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 DDX49Q9Y6V7 483 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ELP1O95163 1332 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FIBPO43427 364 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 OR52Z1P0C646 297 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MARCKSP29966 332 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TXKP42681 527 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SEMA3FQ13275 785 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ACVR2BQ13705 512 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PDIA5Q14554 519 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 IL17AQ16552 155 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CCL14Q16627 93 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 IQSEC1Q6DN90 963 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TAPT1Q6NXT6 567 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 DTHD1Q6ZMT9 781 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SEPT14Q6ZU15 432 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 RIT2Q99578 217 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SENP7Q9BQF6 1050 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ZNF577Q9BSK1 485 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KATNBL1Q9H079 304 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TBC1D22BQ9NU19 505 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FBXO2Q9UK22 296 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PCDHA7Q9UN72 937 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PCDHA12Q9UN75 941 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
CDK5RAP3-220ENST00000581160 IPO5O00410 1097 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FOXN1O15353 648 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 DHX15O43143 795 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CUTAO60888 179 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ATP9AO75110 1047 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PSMD10O75832 226 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 HSPA8P11142 646 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MFSD14CQ5VZR4 134 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ADALQ6DHV7 355 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CCDC62Q6P9F0 684 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 EEPD1Q7L9B9 569 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 OTOP1Q7RTM1 612 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GIMAP8Q8ND71 665 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 RAET1EQ8TD07 263 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SCFD2Q8WU76 684 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PDGFCQ9NRA1 345 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 DDX41Q9UJV9 622 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ZSWIM8A7E2V4 1837 aa10.35□□□□□ -0.75
CDK5RAP3-220ENST00000581160 NFASCO94856 1347 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GOLGA6L22H0YM25 854 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ADCY3O60266 1144 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PRPF40AO75400 957 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ZNF865P0CJ78 1059 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KCNA2P16389 499 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CYP2C19P33261 490 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MCM4P33991 863 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 LONP1P36776 959 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TECP42680 631 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ME1P48163 572 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CTCFP49711 727 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SP2Q02086 613 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ITGB3BPQ13352 177 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 NEDD9Q14511 834 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TTLL4Q14679 1199 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TMEM266Q2M3C6 531 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PRAMEF19Q5SWL8 479 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 AXDND1Q5T1B0 1012 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FBXO16Q8IX29 292 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TRIB2Q92519 343 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GJA10Q969M2 543 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TRIM17Q9Y577 477 aa10.34□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KIAA1217Q5T5P2 1943 aa10.33□□□□□ -0.76
CDK5RAP3-220ENST00000581160 A0A1W2PQ27 194 aa10.33□□□□□ -0.76
CDK5RAP3-220ENST00000581160 A0A1W2PQ64 194 aa10.33□□□□□ -0.76
CDK5RAP3-220ENST00000581160 A0A1W2PQD8 194 aa10.33□□□□□ -0.76
CDK5RAP3-220ENST00000581160 VWA3AA6NCI4 1184 aa10.33□□□□□ -0.76
CDK5RAP3-220ENST00000581160 GAS7O60861 476 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms