RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 RUFY2Q8WXA3 655 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 RIOX1Q9H6W3 641 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 HDAC6Q9UBN7 1215 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 TLL1O43897 1013 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 CYP21A2P08686 494 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 CKBP12277 381 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 MYCLP12524 364 aaPredicted RBP14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 HOXD8P13378 290 aaPredicted RBP14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 PSEN2P49810 448 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 TAP1Q03518 808 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 GRM4Q14833 912 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 PGM5Q15124 567 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 KIAA0753Q2KHM9 967 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 AAK1Q2M2I8 961 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 KRT40Q6A162 431 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 FAM117BQ6P1L5 589 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 DHX38Q92620 1227 aaKnown RBP14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 MTUS1Q9ULD2 1270 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 NCOR1O75376 2440 aa14.57□□□□□ -0.08
SMARCD2-207ENST00000578234 XIRP2A4UGR9 3374 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 ERICH2A1L162 156 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 IFIT3O14879 490 aaKnown RBP14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 CXCL10P02778 98 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 CHMLP26374 656 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 HOXA13P31271 388 aaPredicted RBP14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 PTK7Q13308 1070 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 MFSD10Q14728 455 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 HSDL1Q3SXM5 330 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 CELF3Q5SZQ8 465 aaKnown RBP14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 TMCO2Q7Z6W1 182 aaPredicted RBP14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 PIGSQ96S52 555 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 MTCH2Q9Y6C9 303 aa14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 BAZ2BQ9UIF8 2168 aaKnown RBP14.56□□□□□ -0.08
SMARCD2-207ENST00000578234 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 ABHD14A-ACY1A0A1B0GW23 586 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 GCOM1H8Y6P7 765 aaPredicted RBP14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 CYTH3O43739 400 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 NBNO60934 754 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 POLR2MP0CAP2 368 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 KCNQ1P51787 676 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 WDR5P61964 334 aaKnown RBP14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 PTH1RQ03431 593 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 TROAPQ12815 778 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 SART3Q15020 963 aaKnown RBP14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 CNKSR3Q6P9H4 555 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 RALYLQ86SE5 291 aaKnown RBP14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 HOMER1Q86YM7 354 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 SPATA33Q96N06 139 aa14.55□□□□□ -0.08
SMARCD2-207ENST00000578234 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 E7EWF7 191 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 EFCAB14O75071 495 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 ARHGEF15O94989 841 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 GGPS1O95749 300 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 CCND2P30279 289 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 SP2Q02086 613 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 IKBKEQ14164 716 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 WTAPQ15007 396 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 TRIM71Q2Q1W2 868 aaKnown RBP14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 IL31RAQ8NI17 732 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 C16orf70Q9BSU1 422 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 MLXIPQ9HAP2 919 aa14.54□□□□□ -0.08
SMARCD2-207ENST00000578234 PTPRSQ13332 1948 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 STAM2O75886 525 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 BMP1P13497 986 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 UBA1P22314 1058 aaKnown RBP14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 ZNF618Q5T7W0 954 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 TRAF7Q6Q0C0 670 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 FCHSD1Q86WN1 690 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 ZFP91Q96JP5 570 aaPredicted RBP14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 RAD9AQ99638 391 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 SENP2Q9HC62 589 aa14.53□□□□□ -0.08
SMARCD2-207ENST00000578234 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.08
SMARCD2-207ENST00000578234 EMSYQ7Z589 1322 aa14.52□□□□□ -0.08
SMARCD2-207ENST00000578234 H3BRB1 525 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 SGSM2O43147 1006 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 GJB5O95377 273 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 ICAM3P32942 547 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 DEFB103AP81534 67 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 ZNF200P98182 395 aaPredicted RBP14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 HIC1Q14526 733 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 CATIPQ7Z7H3 387 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 SERINC5Q86VE9 423 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 IGDCC4Q8TDY8 1250 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 MAP4K1Q92918 833 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 WNT8BQ93098 351 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 INPP4AQ96PE3 977 aaPredicted RBP14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 MAP3K14Q99558 947 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 TUT1Q9H6E5 874 aaKnown RBP14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 COG5Q9UP83 839 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 TAF6LQ9Y6J9 622 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 BDP1A6H8Y1 2624 aa14.52□□□□□ -0.09
SMARCD2-207ENST00000578234 LCHNA4D1U4 455 aa14.51□□□□□ -0.09
SMARCD2-207ENST00000578234 RBAK-RBAKDNI3L0D1 243 aa14.51□□□□□ -0.09
SMARCD2-207ENST00000578234 SMARCA1P28370 1054 aa14.51□□□□□ -0.09
SMARCD2-207ENST00000578234 HOXC8P31273 242 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms