RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TMEM88BA6NKF7 163 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 PRCPP42785 496 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 MAP3K9P80192 1104 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 PAK1Q13153 545 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 MCM6Q14566 821 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 HAUS3Q68CZ6 603 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 CYP2W1Q8TAV3 490 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 RAVER2Q9HCJ3 691 aaKnown RBP31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 VAV3Q9UKW4 847 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 GDAQ9Y2T3 454 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 TRPM7Q96QT4 1865 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 PPP1R2P41236 205 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 OAZ1P54368 228 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 KCNK18Q7Z418 384 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 KCTD17Q8N5Z5 321 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 ERMNQ8TAM6 284 aa31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 SAMSN1Q9NSI8 373 aaKnown RBP31.83■■■□□ 2.69
CTDNEP1-210ENST00000574322 MYMKA6NI61 221 aa31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 HMGCS2P54868 508 aa31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 ASIC1P78348 528 aa31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 DHX8Q14562 1220 aaKnown RBP31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 CEP55Q53EZ4 464 aa31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 ANKRD13AQ8IZ07 590 aa31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 CTNND2Q9UQB3 1225 aa31.82■■■□□ 2.68
CTDNEP1-210ENST00000574322 FRMPD4Q14CM0 1322 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 NFIBO00712 420 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 GSDMDP57764 484 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 UNC13DQ70J99 1090 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 CPXCR1Q8N123 301 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 REPS2Q8NFH8 660 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 EXOC1Q9NV70 894 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 CSADQ9Y600 493 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 SNCAIPQ9Y6H5 919 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 MYPNQ86TC9 1320 aa31.81■■■□□ 2.68
CTDNEP1-210ENST00000574322 MEIS1O00470 390 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 DSG3P32926 999 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 APLP1P51693 650 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 SETQ01105 290 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 NELFBQ8WX92 580 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 SLC5A5Q92911 643 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 NAP1L5Q96NT1 182 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 ALAS1P13196 640 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 CDK11BP21127 795 aaKnown RBP31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 RPA1P27694 616 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 STX17P56962 302 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 STIM1Q13586 685 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 VGLL4Q14135 290 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 LDLRAD1Q5T700 205 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 CATSPERGQ6ZRH7 1159 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 ATG4CQ96DT6 458 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 DHTKD1Q96HY7 919 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 TMOD4Q9NZQ9 345 aa31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 CTDP1Q9Y5B0 961 aaPredicted RBP31.8■■■□□ 2.68
CTDNEP1-210ENST00000574322 ATP2A1O14983 1001 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 HUNKP57058 714 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 PDE4DQ08499 809 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 COG2Q14746 738 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 NIPA1Q7RTP0 329 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 MAF1Q9H063 256 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 COL20A1Q9P218 1284 aa31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 ABT1Q9ULW3 272 aaKnown RBP31.79■■■□□ 2.68
CTDNEP1-210ENST00000574322 PSMD10O75832 226 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 BCRP11274 1271 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 STAT3P40763 770 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 MUM1L1Q5H9M0 696 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 APTXQ7Z2E3 356 aaKnown RBP31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 SAPCD2Q86UD0 394 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 KIAA1024Q9UPX6 916 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 MED24O75448 989 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 EHHADHQ08426 723 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 LRRC8AQ8IWT6 810 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 SYTL5Q8TDW5 730 aaPredicted RBP31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 CACTINQ8WUQ7 758 aaKnown RBP31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 CLMNQ96JQ2 1002 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 POLR3CQ9BUI4 534 aaPredicted RBP31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 INTS13Q9NVM9 706 aa31.78■■■□□ 2.68
CTDNEP1-210ENST00000574322 UNCXA6NJT0 531 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 PSMA7O14818 248 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 SPATA31C1P0DKV0 1188 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 PPP2R5CQ13362 524 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 CATSPER3Q86XQ3 398 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 VSTM4Q8IW00 320 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 KIAA1524Q8TCG1 905 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 MXRA8Q9BRK3 442 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 TLL2Q9Y6L7 1015 aa31.77■■■□□ 2.68
CTDNEP1-210ENST00000574322 OTOFQ9HC10 1997 aa31.76■■■□□ 2.68
CTDNEP1-210ENST00000574322 A0A1B0GTH6 734 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 POTEB3A0JP26 581 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 PSMD2Q13200 908 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 POTEBQ6S5H4 581 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 OTOP1Q7RTM1 612 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 DDX12PQ92771 950 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 CTAGE1Q96RT6 745 aa31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 RTN4Q9NQC3 1192 aaKnown RBP31.76■■■□□ 2.67
CTDNEP1-210ENST00000574322 LRRC10BA6NIK2 292 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 STK4Q13043 487 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 NCAPH2Q6IBW4 605 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 TMC6Q7Z403 805 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms