RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 GH1P01241 217 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 CCND2P30279 289 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 PSMC6P62333 389 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 PGM5Q15124 567 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 RTN1Q16799 776 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 LY6KQ17RY6 165 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 CCDC62Q6P9F0 684 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 BLOC1S2Q6QNY1 142 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 SMARCC2Q8TAQ2 1214 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 KCNB2Q92953 911 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 CUL5Q93034 780 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 SEZ6LQ9BYH1 1024 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 C22orf23Q9BZE7 217 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 SNX14Q9Y5W7 946 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 GRIN2DO15399 1336 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 GOLGA8AA7E2F4 631 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 KPNA6O60684 536 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 CPA1P15085 419 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 ITGB8P26012 769 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 PSMA5P28066 241 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 PURAQ00577 322 aaKnown RBP10.45□□□□□ -0.74
NDE1-207ENST00000573203 BECN1Q14457 450 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 VSIG10LQ86VR7 867 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 FAM126BQ8IXS8 530 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 SLC43A3Q8NBI5 491 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 IL31RAQ8NI17 732 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 MTG1Q9BT17 334 aaPredicted RBP10.45□□□□□ -0.74
NDE1-207ENST00000573203 TBX21Q9UL17 535 aa10.45□□□□□ -0.74
NDE1-207ENST00000573203 A6NJR5 290 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 SOX1O00570 391 aaPredicted RBP10.44□□□□□ -0.74
NDE1-207ENST00000573203 TIMP1P01033 207 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 CD4P01730 458 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
NDE1-207ENST00000573203 FPGSQ05932 587 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 ARHGAP1Q07960 439 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 DSG2Q14126 1118 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 LRIT3Q3SXY7 679 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 USP17L6PQ6QN14 398 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 Q6ZUG5 572 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 DHX37Q8IY37 1157 aaKnown RBP10.44□□□□□ -0.74
NDE1-207ENST00000573203 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
NDE1-207ENST00000573203 AFG1LQ8WV93 481 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 BRF1Q92994 677 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
NDE1-207ENST00000573203 SCN10AQ9Y5Y9 1956 aa10.44□□□□□ -0.74
NDE1-207ENST00000573203 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 CNTNAP5Q8WYK1 1306 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 MEIS2O14770 477 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 B4GALT4O60513 344 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 RGS20O76081 388 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 MMP3P08254 477 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 RPS6KB1P23443 525 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 METAP2P50579 478 aaKnown RBP eCLIP10.43□□□□□ -0.74
NDE1-207ENST00000573203 RCAN1P53805 252 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 CHMP4BP1P59074 171 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 APOBRQ0VD83 1088 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 SHHQ15465 462 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 DGKDQ16760 1214 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 FAM47CQ5HY64 1035 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 GPKOWQ92917 476 aaPredicted RBP eCLIP10.43□□□□□ -0.74
NDE1-207ENST00000573203 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 TRPV6Q9H1D0 765 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 ALDH8A1Q9H2A2 487 aaPredicted RBP10.43□□□□□ -0.74
NDE1-207ENST00000573203 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
NDE1-207ENST00000573203 CCDC196A0A1B0GTZ2 297 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 SORBS3O60504 671 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 STAM2O75886 525 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 GGPS1O95749 300 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 SUPT20HL2P0C7V6 817 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 TGFB3P10600 412 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 CDC27P30260 824 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 NAPAP54920 295 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.744e-13■□□□□ 11
NDE1-207ENST00000573203 UBE2SQ16763 222 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 GNPTABQ3T906 1256 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 ARSIQ5FYB1 569 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 C9orf50Q5SZB4 431 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 WWC2Q6AWC2 1192 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 XRRA1Q6P2D8 792 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 TMEM199Q8N511 208 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 PPTC7Q8NI37 304 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 SNX21Q969T3 373 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 EMID1Q96A84 441 aaPredicted RBP10.42□□□□□ -0.74
NDE1-207ENST00000573203 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 USP26Q9BXU7 913 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 RTEL1Q9NZ71 1219 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 DAXXQ9UER7 740 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms