RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 SLC44A5Q8NCS7 719 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 TGFBRAP1Q8WUH2 860 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 TMEM87BQ96K49 555 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 CSRNP1Q96S65 589 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 LLPHQ9BRT6 129 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 KRT23Q9C075 422 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 SUV39H2Q9H5I1 410 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 TOMM22Q9NS69 142 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 ATP8A2Q9NTI2 1148 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 SAP30BPQ9UHR5 308 aaKnown RBP6.69□□□□□ -1.34
SF3B3-210ENST00000567654 TNKSO95271 1327 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 FLT1P17948 1338 aa6.69□□□□□ -1.34
SF3B3-210ENST00000567654 ORC4O43929 436 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 CPNE3O75131 537 aaKnown RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 DEKP35659 375 aaKnown RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 AFF1P51825 1210 aaKnown RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 PLCB3Q01970 1234 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 PCSK7Q16549 785 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 DACT2Q5SW24 774 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 C12orf60Q5U649 245 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 PEAR1Q5VY43 1037 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 CEP135Q66GS9 1140 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 LINC00114Q6XXX2 140 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 USP48Q86UV5 1035 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 MICU3Q86XE3 530 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 TEX11Q8IYF3 940 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 ENAHQ8N8S7 591 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 PHKBQ93100 1093 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 SHISA4Q96DD7 197 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 LACRTQ9GZZ8 138 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 CNNM2Q9H8M5 875 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 DDX4Q9NQI0 724 aaKnown RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 MCM9Q9NXL9 1143 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 ARPP21Q9UBL0 812 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 TTF2Q9UNY4 1162 aaKnown RBP6.68□□□□□ -1.34
SF3B3-210ENST00000567654 MYH7BA7E2Y1 1941 aa6.68□□□□□ -1.34
SF3B3-210ENST00000567654 PARP14Q460N5 1801 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 GOLGA8AA7E2F4 631 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 ZBTB43O43298 467 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 FIBPO43427 364 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 LILRB5O75023 590 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 LDHCP07864 332 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 CDC25BP30305 580 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 GUCY1A2P33402 732 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 LIFRP42702 1097 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 METAP2P50579 478 aaKnown RBP eCLIP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 GSTO1P78417 241 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 WTAPQ15007 396 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 R3HDM1Q15032 1099 aaKnown RBP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 RCSD1Q6JBY9 416 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 KANK3Q6NY19 840 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 TMED8Q6PL24 325 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 NFXL1Q6ZNB6 911 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 RASGRP2Q7LDG7 609 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 TTC6Q86TZ1 520 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 ZNF654Q8IZM8 581 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 TMEM87AQ8NBN3 555 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 EPS8L3Q8TE67 593 aaKnown RBP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 ALKBH8Q96BT7 664 aaKnown RBP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 EYA3Q99504 573 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 OSMRQ99650 979 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 FTOQ9C0B1 505 aaKnown RBP eCLIP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 RNF41Q9H4P4 317 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-210ENST00000567654 RNF19AQ9NV58 838 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 STK17AQ9UEE5 414 aa6.67□□□□□ -1.34
SF3B3-210ENST00000567654 CCDC69A6NI79 296 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 METTL12A8MUP2 240 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 KIF28PB7ZC32 967 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 NFKBIEO00221 500 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PPIP5K2O43314 1243 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 IGSF3O75054 1194 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 WDHD1O75717 1129 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PLEKHA8P1O95397 391 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 BAG3O95817 575 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 NID1P14543 1247 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 CRKP46108 304 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 CACNB3P54284 484 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 HMGN5P82970 282 aaKnown RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 TAGLNQ01995 201 aaKnown RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 FMR1Q06787 632 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■■□□ 16.8
SF3B3-210ENST00000567654 NFIAQ12857 509 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PICALMQ13492 652 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 KLHL40Q2TBA0 621 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 APOBEC3HQ6NTF7 200 aaKnown RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 CDC42EP5Q6NZY7 148 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 PODNQ7Z5L7 613 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 NBPF11Q86T75 865 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 GAS2L3Q86XJ1 694 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 ZFPM1Q8IX07 1006 aa6.66□□□□□ -1.34
SF3B3-210ENST00000567654 DMRTC2Q8IXT2 367 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-210ENST00000567654 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms