RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 SLC26A4O43511 780 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 EDIL3O43854 480 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 COBLO75128 1261 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 TBC1D8O95759 1140 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 BMP3P12645 472 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 CYLC1P35663 651 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-214ENST00000567572 PLA2G4AP47712 749 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 PRELPP51888 382 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 MRPL12P52815 198 aaKnown RBP19.74■□□□□ 0.75
CMTM3-214ENST00000567572 ZBED6P86452 979 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 RASSF7Q02833 373 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 CALCRLQ16602 461 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 SV2BQ7L1I2 683 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 LRRC15Q8TF66 581 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 ARHGEF10LQ9HCE6 1279 aa19.74■□□□□ 0.75
CMTM3-214ENST00000567572 ERLIN1O75477 346 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 UBE2SQ16763 222 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 PPP4R3AQ6IN85 833 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 UNC13DQ70J99 1090 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 CNOT6LQ96LI5 555 aaKnown RBP19.73■□□□□ 0.75
CMTM3-214ENST00000567572 SLF1Q9BQI6 1058 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 GLT8D2Q9H1C3 349 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 PSTPIP2Q9H939 334 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 TMX2Q9Y320 296 aa19.73■□□□□ 0.75
CMTM3-214ENST00000567572 FZD9O00144 591 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 ECE1P42892 770 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 AMPD2Q01433 879 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 FKBP15Q5T1M5 1219 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 SYDE2Q5VT97 1194 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 CENPPQ6IPU0 288 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 GBP3Q9H0R5 595 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 LRWD1Q9UFC0 647 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 PCDHA1Q9Y5I3 950 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 CTAGE15A4D2H0 777 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 IPO7O95373 1038 aaKnown RBP19.72■□□□□ 0.75
CMTM3-214ENST00000567572 EGFRP00533 1210 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 CTAGE8P0CG41 777 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 GCFC2P16383 781 aaKnown RBP19.72■□□□□ 0.75
CMTM3-214ENST00000567572 TECP42680 631 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 PSMD2Q13200 908 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 ZNF771Q7L3S4 317 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-214ENST00000567572 CTAGE6Q86UF2 777 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 POTEDQ86YR6 584 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 CTAGE4Q8IX94 777 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 ACER1Q8TDN7 264 aa19.72■□□□□ 0.75
CMTM3-214ENST00000567572 UPF1Q92900 1129 aaKnown RBP eCLIP19.72■□□□□ 0.754e-7■■■■■ 29.7
CMTM3-214ENST00000567572 CAP2P40123 477 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 TNNI2P48788 182 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 LRRC63Q05C16 580 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 TBC1D8BQ0IIM8 1120 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 STK4Q13043 487 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 ANKRD40Q6AI12 368 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 ARHGAP27Q6ZUM4 889 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 MIGA2Q7L4E1 593 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 GUF1Q8N442 669 aaKnown RBP19.71■□□□□ 0.75
CMTM3-214ENST00000567572 LARP4BQ92615 738 aaKnown RBP19.71■□□□□ 0.75
CMTM3-214ENST00000567572 CDK5RAP3Q96JB5 506 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 RPGRIP1Q96KN7 1286 aa19.71■□□□□ 0.75
CMTM3-214ENST00000567572 REXO2Q9Y3B8 237 aaKnown RBP19.71■□□□□ 0.75
CMTM3-214ENST00000567572 B4DLN1 442 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 EIF3CLB5ME19 914 aaKnown RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 KRT86O43790 486 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 TRIM21P19474 475 aaKnown RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 GMPSP49915 693 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 GRB10Q13322 594 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 RASA3Q14644 834 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 KIAA1755Q5JYT7 1200 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 WDR59Q6PJI9 974 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 PLIN2Q99541 437 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 EIF3CQ99613 913 aaKnown RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 CHP1Q99653 195 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 AMNQ9BXJ7 453 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 GOPCQ9HD26 462 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 MYO6Q9UM54 1294 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 A0A0U1RQJ8 604 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 HNRNPH3P31942 346 aaKnown RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 MTIF2P46199 727 aaKnown RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 SPICE1Q8N0Z3 855 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 ATRIPQ8WXE1 791 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 TEPSINQ96N21 525 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 NOC4LQ9BVI4 516 aaKnown RBP19.7■□□□□ 0.74
CMTM3-214ENST00000567572 BLOC1S4Q9NUP1 217 aa19.7■□□□□ 0.74
CMTM3-214ENST00000567572 ANO9A1A5B4 782 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 PES1O00541 588 aaKnown RBP19.69■□□□□ 0.74
CMTM3-214ENST00000567572 SLC37A4O43826 429 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 TDP2O95551 362 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 TNFAIP1Q13829 316 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 TMEM119Q4V9L6 283 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 MIIPQ5JXC2 388 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 KRT79Q5XKE5 535 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 MICALL2Q8IY33 904 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 KIAA0895Q8NCT3 520 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 FUT8Q9BYC5 575 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 TSGA10Q9BZW7 698 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 ANKZF1Q9H8Y5 726 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 ATAD5Q96QE3 1844 aa19.69■□□□□ 0.74
CMTM3-214ENST00000567572 TXKP42681 527 aa19.68■□□□□ 0.74
CMTM3-214ENST00000567572 IKQ13123 557 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-214ENST00000567572 LONRF2Q1L5Z9 754 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms