RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 NEDD9Q14511 834 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 HOMER1Q86YM7 354 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 MEIS2O14770 477 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 POU3F3P20264 500 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-212ENST00000566121 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-212ENST00000566121 RCAN1P53805 252 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
CMTM3-212ENST00000566121 SP2Q02086 613 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 PCNX4Q63HM2 1172 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-212ENST00000566121 OTOP2Q7RTS6 562 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 SCLYQ96I15 445 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 SLC9A7Q96T83 725 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 NOD1Q9Y239 953 aa17.52■□□□□ 0.4
CMTM3-212ENST00000566121 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 GRXCR1A8MXD5 290 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 MAFGO15525 162 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 MYCLP12524 364 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-212ENST00000566121 SELPP16109 830 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 UBA1P22314 1058 aaKnown RBP17.51■□□□□ 0.39
CMTM3-212ENST00000566121 PBX2P40425 430 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 METTL7BQ6UX53 244 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 SRBD1Q8N5C6 995 aaKnown RBP17.51■□□□□ 0.39
CMTM3-212ENST00000566121 C7orf31Q8N865 590 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 GIMAP8Q8ND71 665 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-212ENST00000566121 IL31RAQ8NI17 732 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 C16orf70Q9BSU1 422 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
CMTM3-212ENST00000566121 SEC63Q9UGP8 760 aaKnown RBP17.51■□□□□ 0.39
CMTM3-212ENST00000566121 FIBPO43427 364 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 EFCAB14O75071 495 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 GGPS1O95749 300 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
CMTM3-212ENST00000566121 EXOSC10Q01780 885 aaKnown RBP17.5■□□□□ 0.39
CMTM3-212ENST00000566121 MFSD10Q14728 455 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 GPNMBQ14956 572 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 KIAA0753Q2KHM9 967 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 CUL5Q93034 780 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 CDHR1Q96JP9 859 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 SPATA33Q96N06 139 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 SLC28A3Q9HAS3 691 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 HDAC6Q9UBN7 1215 aa17.5■□□□□ 0.39
CMTM3-212ENST00000566121 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 CAND2O75155 1236 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 KRT32Q14532 448 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 TRIM71Q2Q1W2 868 aaKnown RBP17.49■□□□□ 0.39
CMTM3-212ENST00000566121 FCHSD1Q86WN1 690 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
CMTM3-212ENST00000566121 KCNB2Q92953 911 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 GAS2L1Q99501 681 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-212ENST00000566121 MLXIPQ9HAP2 919 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
CMTM3-212ENST00000566121 HMGB1P09429 215 aaKnown RBP17.48■□□□□ 0.39
CMTM3-212ENST00000566121 CKBP12277 381 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 TRAF7Q6Q0C0 670 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
CMTM3-212ENST00000566121 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 GPRASP2Q96D09 838 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 NEK1Q96PY6 1258 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 PSTPIP2Q9H939 334 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
CMTM3-212ENST00000566121 YBX2Q9Y2T7 364 aaKnown RBP17.48■□□□□ 0.39
CMTM3-212ENST00000566121 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
CMTM3-212ENST00000566121 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 ABHD14A-ACY1A0A1B0GW23 586 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 H3BRB1 525 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 EPB41L2O43491 1005 aaKnown RBP17.47■□□□□ 0.39
CMTM3-212ENST00000566121 SEMA3FQ13275 785 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 CNKSR3Q6P9H4 555 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 LRRC8DQ7L1W4 858 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 NLRX1Q86UT6 975 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-212ENST00000566121 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 GLT8D2Q9H1C3 349 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 TUT1Q9H6E5 874 aaKnown RBP17.47■□□□□ 0.39
CMTM3-212ENST00000566121 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
CMTM3-212ENST00000566121 TRIP12Q14669 1992 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-212ENST00000566121 KIF28PB7ZC32 967 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 GNAT1P11488 350 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 RPAINQ86UA6 219 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 SYMPKQ92797 1274 aaKnown RBP17.46■□□□□ 0.39
CMTM3-212ENST00000566121 GPR20Q99678 358 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
CMTM3-212ENST00000566121 TANC1Q9C0D5 1861 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms