RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 KAT2BQ92831 832 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 PPP1R12CQ9BZL4 782 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 TRMT13Q9NUP7 481 aaKnown RBP21.85■■□□□ 1.09
TRADD-203ENST00000563348 CYP46A1Q9Y6A2 500 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 SCN10AQ9Y5Y9 1956 aa21.85■■□□□ 1.09
TRADD-203ENST00000563348 SPDYE3A6NKU9 549 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 HOXD8P13378 290 aaPredicted RBP21.84■■□□□ 1.09
TRADD-203ENST00000563348 GPR153Q6NV75 609 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 TMEM199Q8N511 208 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 SPATA33Q96N06 139 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 HIPK3Q9H422 1215 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 RIC8AQ9NPQ8 531 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 BARHL2Q9NY43 387 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 PCDHA6Q9UN73 950 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 PCDHA8Q9Y5H6 950 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 NID2Q14112 1375 aa21.84■■□□□ 1.09
TRADD-203ENST00000563348 STXBP3O00186 592 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 FIBPO43427 364 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 PDIA3P30101 505 aaKnown RBP21.83■■□□□ 1.09
TRADD-203ENST00000563348 CYP2C18P33260 490 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 SEMA3FQ13275 785 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 PPIGQ13427 754 aaKnown RBP eCLIP21.83■■□□□ 1.09
TRADD-203ENST00000563348 HSDL1Q3SXM5 330 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 FAM47CQ5HY64 1035 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 NLRX1Q86UT6 975 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 NOC4LQ9BVI4 516 aaKnown RBP21.83■■□□□ 1.09
TRADD-203ENST00000563348 MLXIPQ9HAP2 919 aa21.83■■□□□ 1.09
TRADD-203ENST00000563348 SMCO2A6NFE2 343 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 CSF2RAP15509 400 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 TOB2Q14106 344 aaPredicted RBP21.82■■□□□ 1.08
TRADD-203ENST00000563348 NEDD9Q14511 834 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 NTRK3Q16288 839 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 PFKFB3Q16875 520 aaPredicted RBP21.82■■□□□ 1.08
TRADD-203ENST00000563348 PPP1R13LQ8WUF5 828 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 SENP7Q9BQF6 1050 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 GLT8D2Q9H1C3 349 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 BCAS3Q9H6U6 928 aa21.82■■□□□ 1.08
TRADD-203ENST00000563348 PRPF3O43395 683 aaKnown RBP21.81■■□□□ 1.08
TRADD-203ENST00000563348 SORBS3O60504 671 aa21.81■■□□□ 1.08
TRADD-203ENST00000563348 CYP2C9P11712 490 aa21.81■■□□□ 1.08
TRADD-203ENST00000563348 CHMP4BP1P59074 171 aa21.81■■□□□ 1.08
TRADD-203ENST00000563348 C16orf59Q7L2K0 433 aa21.81■■□□□ 1.08
TRADD-203ENST00000563348 SESTD1Q86VW0 696 aa21.81■■□□□ 1.08
TRADD-203ENST00000563348 UPF3BQ9BZI7 483 aaKnown RBP21.81■■□□□ 1.08
TRADD-203ENST00000563348 UMODL1Q5DID0 1318 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 HAS3O00219 553 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 F2P00734 622 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 FOSP01100 380 aaPredicted RBP21.8■■□□□ 1.08
TRADD-203ENST00000563348 SCG2P13521 617 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 PSEN2P49810 448 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 ADCY7P51828 1080 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 PKN1Q16512 942 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 METTL7BQ6UX53 244 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 GPRASP2Q96D09 838 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 KATNAL1Q9BW62 490 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 EHMT1Q9H9B1 1298 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 UBIAD1Q9Y5Z9 338 aa21.8■■□□□ 1.08
TRADD-203ENST00000563348 MYH7BA7E2Y1 1941 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 IFNAR1P17181 557 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 ITGB5P18084 799 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 CCL23P55773 120 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 CCT2P78371 535 aaKnown RBP21.79■■□□□ 1.08
TRADD-203ENST00000563348 TMEM240Q5SV17 173 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 CYFIP1Q7L576 1253 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 PHKBQ93100 1093 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 ZNF274Q96GC6 653 aaPredicted RBP21.79■■□□□ 1.08
TRADD-203ENST00000563348 CDHR1Q96JP9 859 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.79■■□□□ 1.08
TRADD-203ENST00000563348 PDRG1Q9NUG6 133 aa21.79■■□□□ 1.08
TRADD-203ENST00000563348 MAFGO15525 162 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
TRADD-203ENST00000563348 ZNF286BP0CG31 522 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 ANAPC15P60006 121 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
TRADD-203ENST00000563348 MFSD10Q14728 455 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 KIAA0753Q2KHM9 967 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 GIMAP8Q8ND71 665 aaPredicted RBP21.78■■□□□ 1.08
TRADD-203ENST00000563348 RNPC3Q96LT9 517 aaKnown RBP21.78■■□□□ 1.08
TRADD-203ENST00000563348 C16orf70Q9BSU1 422 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 ALG1Q9BT22 464 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 RNF26Q9BY78 433 aaPredicted RBP21.78■■□□□ 1.08
TRADD-203ENST00000563348 WNT8AQ9H1J5 351 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 NCOA5Q9HCD5 579 aaKnown RBP21.78■■□□□ 1.08
TRADD-203ENST00000563348 IL23AQ9NPF7 189 aa21.78■■□□□ 1.08
TRADD-203ENST00000563348 ESYT2A0FGR8 921 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 NOP56O00567 594 aaKnown RBP21.77■■□□□ 1.08
TRADD-203ENST00000563348 ACRP10323 421 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 CLK2P49760 499 aaKnown RBP21.77■■□□□ 1.08
TRADD-203ENST00000563348 AP3B2Q13367 1082 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 PTGISQ16647 500 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 GDF6Q6KF10 455 aaPredicted RBP21.77■■□□□ 1.08
TRADD-203ENST00000563348 ZNF365Q70YC5 407 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 C7orf31Q8N865 590 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 ZMYND12Q9H0C1 365 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 JADE2Q9NQC1 790 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 HDAC6Q9UBN7 1215 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 GTF2IRD1Q9UHL9 959 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 NOD1Q9Y239 953 aa21.77■■□□□ 1.08
TRADD-203ENST00000563348 ATP9AO75110 1047 aa21.76■■□□□ 1.07
TRADD-203ENST00000563348 PSRC1Q6PGN9 363 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms