RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 OR6J1Q8NGC5 347 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 IL31RAQ8NI17 732 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 KCNB2Q92953 911 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 TAAR1Q96RJ0 339 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 RMDN3Q96TC7 470 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.97□□□□□ -1.13
SPG11-224ENST00000561268 C22orf23Q9BZE7 217 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 AP5M1Q9H0R1 490 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 CHD9Q3L8U1 2897 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 PRUNE2Q8WUY3 3088 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 UMODL1Q5DID0 1318 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 CNTNAP5Q8WYK1 1306 aa7.97□□□□□ -1.13
SPG11-224ENST00000561268 TTC3P53804 2025 aa7.96□□□□□ -1.13
SPG11-224ENST00000561268 UNC80Q8N2C7 3258 aa7.96□□□□□ -1.13
SPG11-224ENST00000561268 PNMA6FA0A0J9YX94 578 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 PIK3CDO00329 1044 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 EPB41L2O43491 1005 aaKnown RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 NR3C2P08235 984 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 CSF2RAP15509 400 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 DDIT3P35638 169 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 RCAN1P53805 252 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 PSMC6P62333 389 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 TRAF1Q13077 416 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 PGM5Q15124 567 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 STXBP2Q15833 593 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 SKOR2Q2VWA4 1001 aaPredicted RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 TMEM67Q5HYA8 995 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 CREB3L3Q68CJ9 461 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 TEX2Q8IWB9 1127 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 HERVK_113Q902F9 699 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 KAT2BQ92831 832 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 COPS5Q92905 334 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 RNPC3Q96LT9 517 aaKnown RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 INPP4AQ96PE3 977 aaPredicted RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 PIGSQ96S52 555 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 MTG1Q9BT17 334 aaPredicted RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 TTYH1Q9H313 450 aaPredicted RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 HIPK3Q9H422 1215 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 IL23AQ9NPF7 189 aa7.96□□□□□ -1.14
SPG11-224ENST00000561268 DDX41Q9UJV9 622 aaKnown RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 FNDC1Q4ZHG4 1894 aaPredicted RBP7.96□□□□□ -1.14
SPG11-224ENST00000561268 PRRC2BQ5JSZ5 2229 aaKnown RBP7.95□□□□□ -1.14
SPG11-224ENST00000561268 CUL9Q8IWT3 2517 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 ERICH2A1L162 156 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 PRC1O43663 620 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 EIF3JO75822 258 aaKnown RBP7.95□□□□□ -1.14
SPG11-224ENST00000561268 STAM2O75886 525 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 CFBP00751 764 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 GH1P01241 217 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 PFKMP08237 780 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 TXNP10599 105 aaKnown RBP7.95□□□□□ -1.14
SPG11-224ENST00000561268 TGFB3P10600 412 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 EIF2AK2P19525 551 aaKnown RBP7.95□□□□□ -1.14
SPG11-224ENST00000561268 UBA1P22314 1058 aaKnown RBP7.95□□□□□ -1.14
SPG11-224ENST00000561268 ICAM3P32942 547 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 MCM5P33992 734 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 FUT2Q10981 343 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 ZNF697Q5TEC3 545 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 APOA5Q6Q788 366 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 CATIPQ7Z7H3 387 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 VSIG10LQ86VR7 867 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 TMTC2Q8N394 836 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 TMEM199Q8N511 208 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 PPTC7Q8NI37 304 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 GPHNQ9NQX3 736 aaPredicted RBP7.95□□□□□ -1.14
SPG11-224ENST00000561268 PCDHA1Q9Y5I3 950 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 NCOR1O75376 2440 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 TRANK1O15050 2925 aa7.95□□□□□ -1.14
SPG11-224ENST00000561268 FSD2A1L4K1 749 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 MEIS2O14770 477 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CDC45O75419 566 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 PLEKHA8P1O95397 391 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 SUPT20HL2P0C7V6 817 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CALM1P0DP23 149 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CALM2P0DP24 149 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CALM3P0DP25 149 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 DNAJB2P25686 324 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 KIF5BP33176 963 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CYP2C18P33260 490 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 MRPS9P82933 396 aaKnown RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 EXOSC10Q01780 885 aaKnown RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 NBPF20Q3BBV1 942 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 BRDTQ58F21 947 aaPredicted RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 MYSM1Q5VVJ2 828 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 KCNV1Q6PIU1 500 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CASC1Q6TDU7 716 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 TMTC3Q6ZXV5 915 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 NOL8Q76FK4 1167 aaKnown RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 CHST3Q7LGC8 479 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 SKAP1Q86WV1 359 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 HOMER1Q86YM7 354 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 HSCBQ8IWL3 235 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 FBXL16Q8N461 479 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 AFG1LQ8WV93 481 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 DHX38Q92620 1227 aaKnown RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 LZTS2Q9BRK4 669 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 MYL10Q9BUA6 226 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 AGXT2Q9BYV1 514 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms