RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 STAMQ92783 540 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 SLC5A5Q92911 643 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 WDR11Q9BZH6 1224 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 ACAD9Q9H845 621 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 FBXO40Q9UH90 709 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 ZNF214Q9UL59 606 aaPredicted RBP15.45■□□□□ 0.06
TPM1-215ENST00000558868 RLFQ13129 1914 aa15.45■□□□□ 0.06
TPM1-215ENST00000558868 SMCHD1A6NHR9 2005 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 IRF6O14896 467 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 CDC25BP30305 580 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 ZNF75DP51815 510 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 RPS6P62753 249 aaKnown RBP15.44■□□□□ 0.06
TPM1-215ENST00000558868 IRX3P78415 501 aaPredicted RBP15.44■□□□□ 0.06
TPM1-215ENST00000558868 TMEM132BQ14DG7 1078 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 NCAPH2Q6IBW4 605 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 CNNM4Q6P4Q7 775 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 NSMFQ6X4W1 530 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 RIT2Q99578 217 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 POLR3CQ9BUI4 534 aaPredicted RBP15.44■□□□□ 0.06
TPM1-215ENST00000558868 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
TPM1-215ENST00000558868 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
TPM1-215ENST00000558868 LOC285556D6RIA3 1793 aa15.44■□□□□ 0.06
TPM1-215ENST00000558868 PVALEFA0A1B0GWK0 134 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 CBFA2T2O43439 604 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 RHOBTB3O94955 611 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 MUTP22033 750 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 OSBPP22059 807 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 RPA1P27694 616 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 CASP1P29466 404 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 COPB2P35606 906 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 ASIC1P78348 528 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 SPIRE1Q08AE8 756 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 PPP2R5CQ13362 524 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 NCAPHQ15003 741 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 LRCH2Q5VUJ6 765 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 ARHGEF16Q5VV41 709 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 LBX2Q6XYB7 198 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 MRFAP1L1Q96HT8 127 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 CLMNQ96JQ2 1002 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 RMDN3Q96TC7 470 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 ZNF577Q9BSK1 485 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 TEKT3Q9BXF9 490 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 BLOC1S4Q9NUP1 217 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 EXOC1Q9NV70 894 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 AGTPBP1Q9UPW5 1226 aa15.43■□□□□ 0.06
TPM1-215ENST00000558868 AP5Z1O43299 807 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 GAS7O60861 476 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 PSMD10O75832 226 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 CCND2P30279 289 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 UBXN2AP68543 259 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 SNAPC2Q13487 334 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 BAATQ14032 418 aaPredicted RBP15.42■□□□□ 0.06
TPM1-215ENST00000558868 MCM6Q14566 821 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 PLS1Q14651 629 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 KMT5BQ4FZB7 885 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 TREML2Q5T2D2 321 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 SLC30A10Q6XR72 485 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 CYP2W1Q8TAV3 490 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 WNK4Q96J92 1243 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 TAAR1Q96RJ0 339 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 TUFT1Q9NNX1 390 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 JADE2Q9NQC1 790 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 PXMP2Q9NR77 195 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 COL20A1Q9P218 1284 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 DNM3Q9UQ16 869 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 UBIAD1Q9Y5Z9 338 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 PTPRFP10586 1907 aa15.42■□□□□ 0.06
TPM1-215ENST00000558868 PPP1R3GB7ZBB8 358 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 KLRC4O43908 158 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 STAM2O75886 525 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 PSMD2Q13200 908 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 PGM5Q15124 567 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 SPATA1Q5VX52 437 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 MOB2Q70IA6 237 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 OTOP1Q7RTM1 612 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 RIOX2Q8IUF8 465 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 DRC7Q8IY82 874 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 NEK9Q8TD19 979 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 NSUN6Q8TEA1 469 aaKnown RBP15.41■□□□□ 0.06
TPM1-215ENST00000558868 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
TPM1-215ENST00000558868 GJA10Q969M2 543 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 NUDT12Q9BQG2 462 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 RWDD2AQ9UIY3 292 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 KIAA1024Q9UPX6 916 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 RIPK3Q9Y572 518 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 PFASO15067 1338 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 SYNRGQ9UMZ2 1314 aa15.41■□□□□ 0.06
TPM1-215ENST00000558868 COL11A1P12107 1806 aaPredicted RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 IPO5O00410 1097 aaKnown RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 MAFGO15525 162 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 PLA2G4BP0C869 781 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 EIF2AK2P19525 551 aaKnown RBP15.4■□□□□ 0.06
TPM1-215ENST00000558868 PDE4DQ08499 809 aa15.4■□□□□ 0.06
TPM1-215ENST00000558868 PAK1Q13153 545 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms