RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MAGEB6P1A0A0J9YX57 407 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ACSL3O95573 720 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ITIH2P19823 946 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NSFP46459 744 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 PSTPIP2Q9H939 334 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 LGR6Q9HBX8 967 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CDC25CP30307 473 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 KDSRQ06136 332 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 RCN2Q14257 317 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CEP19Q96LK0 163 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TMOD2Q9NZR1 351 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MED21Q13503 144 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ARHGEF25Q86VW2 580 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 RUNDC3BQ96NL0 473 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ATAD2Q6PL18 1390 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 C1orf232A0A0U1RR37 186 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 LCA5LO95447 670 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SMYD4Q8IYR2 804 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GLG1Q92896 1179 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 DDX50Q9BQ39 737 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 EHD4Q9H223 541 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 C14orf93Q9H972 538 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 RB1CC1Q8TDY2 1594 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 HSPA9P38646 679 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TTLL7Q6ZT98 887 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MSANTD4Q8NCY6 345 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ARMT1Q9H993 441 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SAYSD1Q9NPB0 183 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TTI1O43156 1089 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SLC4A1P02730 911 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GSCP56915 257 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 KRT31Q15323 416 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TOM1L2Q6ZVM7 507 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NOSTRINQ8IVI9 506 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 OR2W6PQ8NHA6 318 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 LZTS2Q9BRK4 669 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CRNKL1Q9BZJ0 848 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SCG3Q8WXD2 468 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NLRP3Q96P20 1036 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TMBIM4Q9HC24 238 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GJB4Q9NTQ9 266 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CCDC87Q9NVE4 849 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MKL2Q9ULH7 1088 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GPC5P78333 572 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GFPT1Q06210 699 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GABPAQ06546 454 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ADRM1Q16186 407 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GRAMD1AQ96CP6 724 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TBC1D23Q9NUY8 699 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NBPF26B4DH59 902 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 BCRP11274 1271 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 EAPPQ56P03 285 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TRMT10CQ7L0Y3 403 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 PODNQ7Z5L7 613 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NBPF15Q8N660 670 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 PNKPQ96T60 521 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ESYT2A0FGR8 921 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 H3BQF6 201 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 RAB14P61106 215 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM16LQ309B1 348 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MIGA1Q8NAN2 632 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 FGFR1OP2Q9NVK5 253 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 LEMD3Q9Y2U8 911 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 E7EWF7 191 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 STRNO43815 780 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SERPING1P05155 500 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 EPHB4P54760 987 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MDM2Q00987 491 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 BBS9Q3SYG4 887 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CCDC127Q96BQ5 260 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CCNT1O60563 726 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PRCPP42785 496 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CUL4BQ13620 913 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PPP2R5BQ15173 497 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 RABGAP1LQ5R372 815 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 NYAP1Q6ZVC0 841 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TEKT1Q969V4 418 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 L2HGDHQ9H9P8 463 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CAPN11Q9UMQ6 739 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 PHGDHO43175 533 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ATP1A1P05023 1023 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 CHN1P15882 459 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 RAP1GDS1P52306 607 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 IPO5O00410 1097 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TNNI2P48788 182 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TBC1D22AQ8WUA7 517 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 HDAC11Q96DB2 347 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ZNF594Q96JF6 807 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 MANSC1Q9H8J5 431 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 KCNG1Q9UIX4 513 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TSPAN9O75954 239 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 GNAT2P19087 354 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 KRT17Q04695 432 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 NCAPHQ15003 741 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 WDR75Q8IWA0 830 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 KDRP35968 1356 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 GTPBP10A4D1E9 387 aaKnown RBP3.98□□□□□ -1.77
ATXN3-248ENST00000558190 FOXN1O15353 648 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 TJAP1Q5JTD0 557 aa3.98□□□□□ -1.77
ATXN3-248ENST00000558190 ALKBH5Q6P6C2 394 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms