RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ARIH2O95376 493 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 GJA8P48165 433 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 TMEM63BQ5T3F8 832 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 LENG1Q96BZ8 264 aaPredicted RBP16.09■□□□□ 0.17
SNX6-206ENST00000556162 NAP1L4Q99733 375 aaKnown RBP16.09■□□□□ 0.17
SNX6-206ENST00000556162 AP5M1Q9H0R1 490 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
SNX6-206ENST00000556162 Q9Y3F1 56 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 FAM205CA6NFA0 338 aa16.08■□□□□ 0.17
SNX6-206ENST00000556162 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.17
SNX6-206ENST00000556162 EDIL3O43854 480 aa16.08■□□□□ 0.17
SNX6-206ENST00000556162 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.17
SNX6-206ENST00000556162 CAPN2P17655 700 aa16.08■□□□□ 0.17
SNX6-206ENST00000556162 PRR16Q569H4 304 aa16.08■□□□□ 0.17
SNX6-206ENST00000556162 MOXD1Q6UVY6 613 aa16.08■□□□□ 0.17
SNX6-206ENST00000556162 PLA2G4DQ86XP0 818 aa16.08■□□□□ 0.17
SNX6-206ENST00000556162 CYP3A7-CYP3A51PA0A087WV96 503 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 KIF28PB7ZC32 967 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 STX6O43752 255 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 CYP3A7P24462 503 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.16
SNX6-206ENST00000556162 SEMA3FQ13275 785 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 NEDD9Q14511 834 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 GJC2Q5T442 439 aaPredicted RBP16.08■□□□□ 0.16
SNX6-206ENST00000556162 TLK2Q86UE8 772 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 ARRDC4Q8NCT1 418 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
SNX6-206ENST00000556162 SENP7Q9BQF6 1050 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
SNX6-206ENST00000556162 LRRC37A2A6NM11 1700 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 CCNT1O60563 726 aaKnown RBP16.07■□□□□ 0.16
SNX6-206ENST00000556162 PGK1P00558 417 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 GH1P01241 217 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
SNX6-206ENST00000556162 ARP10275 920 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
SNX6-206ENST00000556162 SP2Q02086 613 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 RNF180Q86T96 592 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 DHX37Q8IY37 1157 aaKnown RBP16.07■□□□□ 0.16
SNX6-206ENST00000556162 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 COPS5Q92905 334 aa16.07■□□□□ 0.16
SNX6-206ENST00000556162 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
SNX6-206ENST00000556162 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
SNX6-206ENST00000556162 TDP2O95551 362 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 GGPS1O95749 300 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
SNX6-206ENST00000556162 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 UBA1P22314 1058 aaKnown RBP16.06■□□□□ 0.16
SNX6-206ENST00000556162 GJA9P57773 515 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 LAMC2Q13753 1193 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 Q4G0T1 1027 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 DDX25Q9UHL0 483 aaKnown RBP16.06■□□□□ 0.16
SNX6-206ENST00000556162 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
SNX6-206ENST00000556162 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
SNX6-206ENST00000556162 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 ATP9AO75110 1047 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 PTGS1P23219 599 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 BRDTQ58F21 947 aaPredicted RBP16.05■□□□□ 0.16
SNX6-206ENST00000556162 CELF3Q5SZQ8 465 aaKnown RBP16.05■□□□□ 0.16
SNX6-206ENST00000556162 MBOAT7Q96N66 472 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 UPF3AQ9H1J1 476 aaKnown RBP16.05■□□□□ 0.16
SNX6-206ENST00000556162 AGO4Q9HCK5 861 aaKnown RBP16.05■□□□□ 0.16
SNX6-206ENST00000556162 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 ADAMTS4O75173 837 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 KCNA2P16389 499 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 TRAPPC10P48553 1259 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 ARHGAP1Q07960 439 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 FERMT3Q86UX7 667 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 EMID1Q96A84 441 aaPredicted RBP16.05■□□□□ 0.16
SNX6-206ENST00000556162 LENG9Q96B70 501 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 SDF4Q9BRK5 362 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 ZNF577Q9BSK1 485 aa16.05■□□□□ 0.16
SNX6-206ENST00000556162 IPO5O00410 1097 aaKnown RBP16.04■□□□□ 0.16
SNX6-206ENST00000556162 SORBS3O60504 671 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
SNX6-206ENST00000556162 CPT1AP50416 773 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 LRRC41Q15345 812 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 FSCN1Q16658 493 aaKnown RBP16.04■□□□□ 0.16
SNX6-206ENST00000556162 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 BRAPQ7Z569 592 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 ANKLE1Q8NAG6 615 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 TSHZ2Q9NRE2 1034 aa16.04■□□□□ 0.16
SNX6-206ENST00000556162 ZEB2O60315 1214 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 MARCH6O60337 910 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 SOX10P56693 466 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 NKX3-2P78367 333 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 RILPL1Q5EBL4 403 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms