RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CTCFLQ8NI51 663 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-203ENST00000554074 AFAP1L1Q8TED9 768 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 TMEM87BQ96K49 555 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 CTAGE1Q96RT6 745 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 SLC9A7Q96T83 725 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 LZTS2Q9BRK4 669 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-203ENST00000554074 SLC28A3Q9HAS3 691 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 LY9Q9HBG7 655 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 BRWD1Q9NSI6 2320 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 GTF2IRD1Q9UHL9 959 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 NOD1Q9Y239 953 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 TAF6LQ9Y6J9 622 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 REV3LO60673 3130 aa7.65□□□□□ -1.19
SLIRP-203ENST00000554074 COL4A4P53420 1690 aaPredicted RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 CXCL10P02778 98 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 CALM1P0DP23 149 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 CALM2P0DP24 149 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 CALM3P0DP25 149 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 MYCLP12524 364 aaPredicted RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 SELPP16109 830 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 ATP2A2P16615 1042 aaKnown RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 UBA1P22314 1058 aaKnown RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 ICAM3P32942 547 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 MCM5P33992 734 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 LIFRP42702 1097 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 PSEN2P49810 448 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 PTK7Q13308 1070 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 MFSD10Q14728 455 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 XRRA1Q6P2D8 792 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 CASC1Q6TDU7 716 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 DEFB128Q7Z7B8 93 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 TEX2Q8IWB9 1127 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 ZNF654Q8IZM8 581 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 C7orf31Q8N865 590 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 IL31RAQ8NI17 732 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 SPATA33Q96N06 139 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 INPP4AQ96PE3 977 aaPredicted RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 ESYT1Q9BSJ8 1104 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 LSG1Q9H089 658 aaKnown RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 NKX2-4Q9H2Z4 354 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 HDAC6Q9UBN7 1215 aa7.64□□□□□ -1.19
SLIRP-203ENST00000554074 YBX2Q9Y2T7 364 aaKnown RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 TCF20Q9UGU0 1960 aaKnown RBP7.64□□□□□ -1.19
SLIRP-203ENST00000554074 ZBBXA8MT70 800 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 SH2B2O14492 632 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 PRC1O43663 620 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 EFCAB14O75071 495 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 GGPS1O95749 300 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 CKBP12277 381 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 POU3F3P20264 500 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 HOXC8P31273 242 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 IRX6P78412 446 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 MRPS9P82933 396 aaKnown RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 SP2Q02086 613 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 NEDD9Q14511 834 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 NECTIN1Q15223 517 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 KIAA0753Q2KHM9 967 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 TRIM71Q2Q1W2 868 aaKnown RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 HSDL1Q3SXM5 330 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 BMP2KLQ5H9B9 411 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 PPP2R2DQ66LE6 453 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 LRRC8DQ7L1W4 858 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 CHST3Q7LGC8 479 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 FCHSD1Q86WN1 690 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 DHX38Q92620 1227 aaKnown RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 SYMPKQ92797 1274 aaKnown RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 CUL5Q93034 780 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 RRP36Q96EU6 259 aaKnown RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 SENP7Q9BQF6 1050 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 C16orf70Q9BSU1 422 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 PRDM12Q9H4Q4 367 aa7.63□□□□□ -1.19
SLIRP-203ENST00000554074 SEC63Q9UGP8 760 aaKnown RBP7.63□□□□□ -1.19
SLIRP-203ENST00000554074 EVPLQ92817 2033 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 VCANP13611 3396 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 EMSYQ7Z589 1322 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 ABHD14A-ACY1A0A1B0GW23 586 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 CCDC69A6NI79 296 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 SPATA31C2B4DYI2 1134 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 KIF28PB7ZC32 967 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 MEIS2O14770 477 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 SLC27A2O14975 620 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 FIBPO43427 364 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 CAND2O75155 1236 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 ZNF286BP0CG31 522 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 RABGGTBP53611 331 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 ADGRE1Q14246 886 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 GPNMBQ14956 572 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 RNF20Q5VTR2 975 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 PCNX4Q63HM2 1172 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 CREB3L3Q68CJ9 461 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 CNKSR3Q6P9H4 555 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 TRAF7Q6Q0C0 670 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 METTL7BQ6UX53 244 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 SERINC5Q86VE9 423 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 SGMS1Q86VZ5 419 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 HERC6Q8IVU3 1022 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 USP38Q8NB14 1042 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms