RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 PTK7Q13308 1070 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 MFSD10Q14728 455 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 KIAA0753Q2KHM9 967 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 TSGA10IPQ3SY00 556 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PCNX4Q63HM2 1172 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 DEFB128Q7Z7B8 93 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 SGMS1Q86VZ5 419 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PIBF1Q8WXW3 757 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 MYLIPQ8WY64 445 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 SCLYQ96I15 445 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 CCDC136Q96JN2 1154 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 SLC9A7Q96T83 725 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 WNT8AQ9H1J5 351 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 TTYH1Q9H313 450 aaPredicted RBP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 TUT1Q9H6E5 874 aaKnown RBP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 HDAC6Q9UBN7 1215 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 GTF2IRD1Q9UHL9 959 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 ZNF215Q9UL58 517 aaPredicted RBP7.5□□□□□ -1.21
FOXN3-205ENST00000553904 PCDHA11Q9Y5I1 949 aa7.5□□□□□ -1.21
FOXN3-205ENST00000553904 ABHD14A-ACY1A0A1B0GW23 586 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 C17orf102A2RUQ5 167 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 GRXCR1A8MXD5 290 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 hCG_1984214I3L0E3 225 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 HAS3O00219 553 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 REC8O95072 547 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 F2P00734 622 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 FOSP01100 380 aaPredicted RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 RPLP2P05387 115 aaKnown RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 HOXD8P13378 290 aaPredicted RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 PSMA5P28066 241 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 IKBKEQ14164 716 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 GRIN2CQ14957 1233 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 HSDL1Q3SXM5 330 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 PPP2R2DQ66LE6 453 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 GDF6Q6KF10 455 aaPredicted RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 USP17L6PQ6QN14 398 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 METTL7BQ6UX53 244 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 LRRC8DQ7L1W4 858 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 SRBD1Q8N5C6 995 aaKnown RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 ZNF713Q8N859 430 aaPredicted RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 INPP4AQ96PE3 977 aaPredicted RBP7.49□□□□□ -1.21
FOXN3-205ENST00000553904 ZBED2Q9BTP6 218 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 MYL10Q9BUA6 226 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 UMODL1Q5DID0 1318 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 EMSYQ7Z589 1322 aa7.49□□□□□ -1.21
FOXN3-205ENST00000553904 RSPH10B2B2RC85 870 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 MEIS2O14770 477 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 ZBTB43O43298 467 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 EPB41L2O43491 1005 aaKnown RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 GTPBP6O43824 516 aaPredicted RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CAND2O75155 1236 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 RGS20O76081 388 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 NEFLP07196 543 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 RSPH10BP0C881 870 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CKBP12277 381 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 IGFBP4P22692 258 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 PBX2P40425 430 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 RCAN1P53805 252 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 MRPS9P82933 396 aaKnown RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 EXOSC10Q01780 885 aaKnown RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 AKAP17AQ02040 695 aaKnown RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 SP2Q02086 613 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 RBL2Q08999 1139 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CNKSR3Q6P9H4 555 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 RSPH3Q86UC2 560 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CCDC82Q8N4S0 544 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CCDC12Q8WUD4 166 aaPredicted RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 SEPT1Q8WYJ6 367 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 KAT2BQ92831 832 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 ATP6V0A1Q93050 837 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 C16orf70Q9BSU1 422 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 CXXC1Q9P0U4 656 aaPredicted RBP7.48□□□□□ -1.21
FOXN3-205ENST00000553904 TAF6LQ9Y6J9 622 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 TRIOBPQ9H2D6 2365 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 NRCAMQ92823 1304 aa7.48□□□□□ -1.21
FOXN3-205ENST00000553904 TLL1O43897 1013 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 EIF5BO60841 1220 aaKnown RBP7.47□□□□□ -1.21
FOXN3-205ENST00000553904 PLEKHA8P1O95397 391 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 ZNF286BP0CG31 522 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 UBA1P22314 1058 aaKnown RBP7.47□□□□□ -1.21
FOXN3-205ENST00000553904 ZNF76P36508 570 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 THPOP40225 353 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 NAPAP54920 295 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 MTMR1Q13613 665 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 RTN1Q16799 776 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 AAK1Q2M2I8 961 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 SLC35G1Q2M3R5 365 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 APOA5Q6Q788 366 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 BLOC1S2Q6QNY1 142 aa7.47□□□□□ -1.21
FOXN3-205ENST00000553904 FAM43BQ6ZT52 329 aaPredicted RBP7.47□□□□□ -1.21
FOXN3-205ENST00000553904 TMTC3Q6ZXV5 915 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms