RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BCRP11274 1271 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 KCNB1Q14721 858 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 CT47A1Q5JQC4 288 aaPredicted RBP21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 OTOP1Q7RTM1 612 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 SMYD4Q8IYR2 804 aaPredicted RBP21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 RMDN3Q96TC7 470 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 NT5C3AQ9H0P0 336 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 AGTPBP1Q9UPW5 1226 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 UNCXA6NJT0 531 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 PPP1R3GB7ZBB8 358 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 MED24O75448 989 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 AMPD3Q01432 767 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 MCM6Q14566 821 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 PLS1Q14651 629 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 PGM5Q15124 567 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 SV2BQ7L1I2 683 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 PDCD2LQ9BRP1 358 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 ACAD9Q9H845 621 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 ZNF408Q9H9D4 720 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 PXMP2Q9NR77 195 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 BTBD7Q9P203 1132 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 UBIAD1Q9Y5Z9 338 aa21.93■■□□□ 1.1
RBFOX1-215ENST00000553186 EIF2AK2P19525 551 aaKnown RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 ERCC5P28715 1186 aaPredicted RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 HAUS3Q68CZ6 603 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 NCAPH2Q6IBW4 605 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 NIPA1Q7RTP0 329 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 MB21D1Q8N884 522 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 ASCC2Q9H1I8 757 aaPredicted RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 RBBP6Q7Z6E9 1792 aaKnown RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 POTEB3A0JP26 581 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 EML1O00423 815 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 PEX10O60683 326 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 SPATA31C1P0DKV0 1188 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 RPA1P27694 616 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 SEMA3FQ13275 785 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 PPP2R5CQ13362 524 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 KMT5BQ4FZB7 885 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 ZNF658Q5TYW1 1059 aaPredicted RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 LRCH2Q5VUJ6 765 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 POTEBQ6S5H4 581 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 CATSPER3Q86XQ3 398 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 ENOX1Q8TC92 643 aaKnown RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 ZNF577Q9BSK1 485 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 TRIM5Q9C035 493 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 MAF1Q9H063 256 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 A1CFQ9NQ94 594 aaKnown RBP21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 CYP39A1Q9NYL5 469 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 KIAA1024Q9UPX6 916 aa21.92■■□□□ 1.1
RBFOX1-215ENST00000553186 RHOBTB3O94955 611 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 ZNF75DP51815 510 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 DHX8Q14562 1220 aaKnown RBP21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 ERMNQ8TAM6 284 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 SLC10A4Q96EP9 437 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 WDR11Q9BZH6 1224 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 KCNH7Q9NS40 1196 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 A0A0G2JMZ2 1700 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 MYMKA6NI61 221 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 IPO5O00410 1097 aaKnown RBP21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 IRX3P78415 501 aaPredicted RBP21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 GPAT2Q6NUI2 795 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 B3GNT9Q6UX72 402 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 FASTKD5Q7L8L6 764 aaKnown RBP21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 JADE2Q9NQC1 790 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 STK24Q9Y6E0 443 aa21.91■■□□□ 1.1
RBFOX1-215ENST00000553186 CNNM4Q6P4Q7 775 aa21.9■■□□□ 1.1
RBFOX1-215ENST00000553186 CHST13Q8NET6 341 aa21.9■■□□□ 1.1
RBFOX1-215ENST00000553186 GAS7O60861 476 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 HERVK_113P62684 666 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 ARHGEF16Q5VV41 709 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 RIOX2Q8IUF8 465 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 TRMT44Q8IYL2 757 aaKnown RBP21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 TRIM44Q96DX7 344 aaPredicted RBP21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 RIT2Q99578 217 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 FANCLQ9NW38 375 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 GDAQ9Y2T3 454 aa21.89■■□□□ 1.1
RBFOX1-215ENST00000553186 POTEFA5A3E0 1075 aa21.89■■□□□ 1.09
RBFOX1-215ENST00000553186 E9PMD0 336 aa21.89■■□□□ 1.09
RBFOX1-215ENST00000553186 ASIC1P78348 528 aa21.89■■□□□ 1.09
RBFOX1-215ENST00000553186 POTEGQ6S5H5 508 aa21.89■■□□□ 1.09
RBFOX1-215ENST00000553186 HSD17B14Q9BPX1 270 aa21.89■■□□□ 1.09
RBFOX1-215ENST00000553186 TPM4P67936 248 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 FKBP1BP68106 108 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 SNAPC2Q13487 334 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 VSIG10LQ86VR7 867 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 EIF2AK1Q9BQI3 630 aaKnown RBP21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 POLR3CQ9BUI4 534 aaPredicted RBP21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 SPATC1LQ9H0A9 340 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 DHX15O43143 795 aaKnown RBP21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 CNMDO75829 334 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 ATP1A3P13637 1013 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 KLHL10Q6JEL2 608 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 XRRA1Q6P2D8 792 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 GIMAP8Q8ND71 665 aaPredicted RBP21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 AGO4Q9HCK5 861 aaKnown RBP21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 NMRK2Q9NPI5 230 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 NFE2L3Q9Y4A8 694 aa21.88■■□□□ 1.09
RBFOX1-215ENST00000553186 PRCPP42785 496 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 MTMR1Q13613 665 aa21.87■■□□□ 1.09
RBFOX1-215ENST00000553186 HS1BP3Q53T59 392 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms