RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 HYOU1Q9Y4L1 999 aa13.67□□□□□ -0.22
HDAC7-230ENST00000552960 SHOX2O60902 331 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 FAM153BP0C7A2 387 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 CCNE1P24864 410 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 CALML3P27482 149 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 TECP42680 631 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 SEC24CP53992 1094 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 FAM153CQ494X1 144 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 LRRC15Q8TF66 581 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 MTA3Q9BTC8 594 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 ZC3H12CQ9C0D7 883 aaKnown RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 FAM153AQ9UHL3 310 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.229e-7■■■■■ 39.8
HDAC7-230ENST00000552960 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 DDAH1O94760 285 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 FTCDO95954 541 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 HLTFQ14527 1009 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 ARL6IP4Q66PJ3 421 aaKnown RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 SPTY2D1Q68D10 685 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 TTYH3Q9C0H2 523 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 YY1AP1Q9H869 796 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 BCCIPQ9P287 314 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 SALL4Q9UJQ4 1053 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 COL11A2P13942 1736 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 GRIN2DO15399 1336 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 FAM170AA1A519 330 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 LRRC53A6NM62 1247 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 CACNB3P54284 484 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 FAM114A1Q8IWE2 563 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC7-230ENST00000552960 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
HDAC7-230ENST00000552960 HEXIM1O94992 359 aaKnown RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 PDE6BP35913 854 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 C15orf52Q6ZUT6 534 aaKnown RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 KLHL7Q8IXQ5 586 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 MMGT1Q8N4V1 131 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 TIAM2Q8IVF5 1701 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 TNS1Q9HBL0 1735 aaKnown RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 ATP2C2O75185 946 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 GLI1P08151 1106 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 TCP1P17987 556 aaKnown RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 KIF5BP33176 963 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 RHBDL3P58872 404 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 TFAP4Q01664 338 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 TRADDQ15628 312 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 C12orf60Q5U649 245 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 GBP6Q6ZN66 633 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 DHTKD1Q96HY7 919 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 RNPC3Q96LT9 517 aaKnown RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 KRT12Q99456 494 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 JPH2Q9BR39 696 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-230ENST00000552960 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
HDAC7-230ENST00000552960 LRRC41Q15345 812 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 RETREG2Q8NC44 543 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 DAGLAQ9Y4D2 1042 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC7-230ENST00000552960 MAP2K2P36507 400 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 SLC1A4P43007 532 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 KCNB1Q14721 858 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 CLEC10AQ8IUN9 316 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 MTMR8Q96EF0 704 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 TRIM9Q9C026 710 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
HDAC7-230ENST00000552960 BACH1O14867 736 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 TXKP42681 527 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 IFT88Q13099 833 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 EMBQ6PCB8 327 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 KBTBD4Q9NVX7 518 aa13.64□□□□□ -0.23
HDAC7-230ENST00000552960 E7EVH7 732 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 C21orf2O43822 256 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 FGRP09769 529 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 EHHADHQ08426 723 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 CFAP221Q4G0U5 840 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 KIAA0825Q8IV33 1275 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 IFT20Q8IY31 132 aa13.63□□□□□ -0.23
HDAC7-230ENST00000552960 NOC3LQ8WTT2 800 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms