RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PPP1R14AQ96A00 147 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 FAM46AQ96IP4 442 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 MYRFLQ96LU7 910 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 IPO9Q96P70 1041 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 SPATA9Q9BWV2 254 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 GBP3Q9H0R5 595 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 FAM86C1Q9NVL1 165 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 FANCLQ9NW38 375 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 LRP2BPQ9P2M1 347 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 ZMYM5Q9UJ78 669 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 FBXL21Q9UKT6 434 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 TPX2Q9ULW0 747 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 SUGT1Q9Y2Z0 365 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 LAMA3Q16787 3333 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 CENPFP49454 3210 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 ANKRD31Q8N7Z5 1873 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 THSD7BQ9C0I4 1608 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 CCDC163A0A0D9SF12 145 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 ESYT3A0FGR9 886 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 C9IYK1 514 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 NOP56O00567 594 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 PPP1R12AO14974 1030 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 DHX15O43143 795 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 PPM1BO75688 479 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 A1BGP04217 495 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 HSP90AB1P08238 724 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 HSPA5P11021 654 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 COL8A1P27658 744 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 IL6STP40189 918 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 MBTPS1Q14703 1052 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 TCEA2Q15560 299 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 HLFQ16534 295 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 LONRF2Q1L5Z9 754 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 PLEKHG4Q58EX7 1191 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 ZC3H12BQ5HYM0 836 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 NOL9Q5SY16 702 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 NBPF12Q5TAG4 269 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF790Q6PG37 636 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 CLEC4GQ6UXB4 293 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 CLEC10AQ8IUN9 316 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 FAM20CQ8IXL6 584 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 DZIP1LQ8IYY4 767 aaKnown RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 SYNPOQ8N3V7 929 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 CRACR2BQ8N4Y2 399 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 ZSWIM2Q8NEG5 633 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 PPP1R13LQ8WUF5 828 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 SGSM3Q96HU1 749 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 COX4I2Q96KJ9 171 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF512BQ96KM6 892 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 KREMEN1Q96MU8 473 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 RTFDC1Q9BY42 306 aaPredicted RBP3.16□□□□□ -1.9
CPSF6-207ENST00000551516 TMEM260Q9NX78 707 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 PCDHB12Q9Y5F1 795 aa3.16□□□□□ -1.9
CPSF6-207ENST00000551516 UBR2Q8IWV8 1755 aa3.15□□□□□ -1.9
CPSF6-207ENST00000551516 ABCC12Q96J65 1359 aa3.15□□□□□ -1.9
CPSF6-207ENST00000551516 COL4A1P02462 1669 aa3.15□□□□□ -1.9
CPSF6-207ENST00000551516 FAM155AB1AL88 458 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 RNF225M0QZC1 329 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 DIAPH1O60610 1272 aaKnown RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 SLITRK5O94991 958 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 EPHX1P07099 455 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ITGA4P13612 1032 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 CD247P20963 164 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 IBSPP21815 317 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 LORP23490 312 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 AUHQ13825 339 aaKnown RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 HSP90AA2PQ14568 343 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 SLC10A6Q3KNW5 377 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 SLC10A5Q5PT55 438 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 AXDND1Q5T1B0 1012 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 DCAF15Q66K64 600 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 DLK2Q6UY11 383 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF662Q6ZS27 426 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 BEND4Q6ZU67 534 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 C16orf86Q6ZW13 317 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 PPFIBP1Q86W92 1011 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 LDHDQ86WU2 507 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 C2CD5Q86YS7 1000 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 C7orf61Q8IZ16 206 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF34Q8IZ26 560 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ARMC10Q8N2F6 343 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 TOP6BLQ8N6T0 577 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ZBTB38Q8NAP3 1195 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 LRRN4CLQ8ND94 238 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 BVESQ8NE79 360 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 RIN3Q8TB24 985 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 RNF141Q8WVD5 230 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ABHD8Q96I13 439 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 MEGF10Q96KG7 1140 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 FGD4Q96M96 766 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 FBXL18Q96ME1 805 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 PSMG3-AS1Q96PY0 264 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 PLEKHF1Q96S99 279 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 PSMD1Q99460 953 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 CDC6Q99741 560 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 HAUS7Q99871 368 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ASPNQ9BXN1 380 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 ASCC2Q9H1I8 757 aaPredicted RBP3.15□□□□□ -1.91
CPSF6-207ENST00000551516 TMX1Q9H3N1 280 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 KANSL2Q9H9L4 492 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms