RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CCDC62Q6P9F0 684 aa24.38■■□□□ 1.49
NEK3-202ENST00000550841 GIMAP8Q8ND71 665 aaPredicted RBP24.38■■□□□ 1.49
NEK3-202ENST00000550841 AP5M1Q9H0R1 490 aa24.38■■□□□ 1.49
NEK3-202ENST00000550841 DDX41Q9UJV9 622 aaKnown RBP24.38■■□□□ 1.49
NEK3-202ENST00000550841 MYH7BA7E2Y1 1941 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 CYP3A7-CYP3A51PA0A087WV96 503 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 VPS37CA5D8V6 355 aaPredicted RBP24.37■■□□□ 1.49
NEK3-202ENST00000550841 SGPL1O95470 568 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 CYP3A7P24462 503 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 SETQ01105 290 aaPredicted RBP24.37■■□□□ 1.49
NEK3-202ENST00000550841 NEDD9Q14511 834 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 LETM2Q2VYF4 491 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 LHX8Q68G74 356 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 PLA2G4DQ86XP0 818 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 SENP7Q9BQF6 1050 aa24.37■■□□□ 1.49
NEK3-202ENST00000550841 NOL7Q9UMY1 257 aaKnown RBP24.37■■□□□ 1.49
NEK3-202ENST00000550841 GNEQ9Y223 722 aaKnown RBP24.37■■□□□ 1.49
NEK3-202ENST00000550841 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.36■■□□□ 1.49
NEK3-202ENST00000550841 STX6O43752 255 aa24.36■■□□□ 1.49
NEK3-202ENST00000550841 TFRCP02786 760 aaKnown RBP24.36■■□□□ 1.49
NEK3-202ENST00000550841 GJA8P48165 433 aa24.36■■□□□ 1.49
NEK3-202ENST00000550841 EARS2Q5JPH6 523 aaKnown RBP24.36■■□□□ 1.49
NEK3-202ENST00000550841 PPP4R3AQ6IN85 833 aa24.36■■□□□ 1.49
NEK3-202ENST00000550841 ARRDC4Q8NCT1 418 aa24.36■■□□□ 1.49
NEK3-202ENST00000550841 XPNPEP3Q9NQH7 507 aa24.36■■□□□ 1.49
NEK3-202ENST00000550841 LRRC37A2A6NM11 1700 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 FAM86B1E9PN63 330 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 GH1P01241 217 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 FAM86B2P0C5J1 330 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 TRAPPC10P48553 1259 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 LY6KQ17RY6 165 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 Q4G0T1 1027 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 PRR16Q569H4 304 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 CYP2W1Q8TAV3 490 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 U2AF1L4Q8WU68 220 aaKnown RBP24.35■■□□□ 1.49
NEK3-202ENST00000550841 KCNH7Q9NS40 1196 aa24.35■■□□□ 1.49
NEK3-202ENST00000550841 DYNC1LI2O43237 492 aaPredicted RBP24.34■■□□□ 1.49
NEK3-202ENST00000550841 CCNT1O60563 726 aaKnown RBP24.34■■□□□ 1.49
NEK3-202ENST00000550841 LAMC2Q13753 1193 aa24.34■■□□□ 1.49
NEK3-202ENST00000550841 BRDTQ58F21 947 aaPredicted RBP24.34■■□□□ 1.49
NEK3-202ENST00000550841 ANO1Q5XXA6 986 aa24.34■■□□□ 1.49
NEK3-202ENST00000550841 BRAPQ7Z569 592 aa24.34■■□□□ 1.49
NEK3-202ENST00000550841 TLK2Q86UE8 772 aa24.34■■□□□ 1.49
NEK3-202ENST00000550841 DHX37Q8IY37 1157 aaKnown RBP24.34■■□□□ 1.49
NEK3-202ENST00000550841 CRISPLD2Q9H0B8 497 aa24.34■■□□□ 1.49
NEK3-202ENST00000550841 OGDHLQ9ULD0 1010 aa24.34■■□□□ 1.49
NEK3-202ENST00000550841 IGLV3-22A0A075B6J6 115 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 KIF28PB7ZC32 967 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 EDIL3O43854 480 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 ARIH2O95376 493 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 GJA9P57773 515 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 SEMA3FQ13275 785 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 CELF3Q5SZQ8 465 aaKnown RBP24.33■■□□□ 1.49
NEK3-202ENST00000550841 RNF180Q86T96 592 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 OR6J1Q8NGC5 347 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 MBOAT7Q96N66 472 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 UPF3AQ9H1J1 476 aaKnown RBP24.33■■□□□ 1.49
NEK3-202ENST00000550841 MLXIPQ9HAP2 919 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 DDX25Q9UHL0 483 aaKnown RBP24.33■■□□□ 1.49
NEK3-202ENST00000550841 HTTP42858 3142 aa24.33■■□□□ 1.49
NEK3-202ENST00000550841 ZEB2O60315 1214 aa24.32■■□□□ 1.48
NEK3-202ENST00000550841 ARP10275 920 aa24.32■■□□□ 1.48
NEK3-202ENST00000550841 NKX3-2P78367 333 aa24.32■■□□□ 1.48
NEK3-202ENST00000550841 ORC2Q13416 577 aaPredicted RBP24.32■■□□□ 1.48
NEK3-202ENST00000550841 HABP4Q5JVS0 413 aaKnown RBP24.32■■□□□ 1.48
NEK3-202ENST00000550841 EMID1Q96A84 441 aaPredicted RBP24.32■■□□□ 1.48
NEK3-202ENST00000550841 SDF4Q9BRK5 362 aa24.32■■□□□ 1.48
NEK3-202ENST00000550841 ZSCAN16Q9H4T2 348 aaPredicted RBP24.32■■□□□ 1.48
NEK3-202ENST00000550841 AGO4Q9HCK5 861 aaKnown RBP24.32■■□□□ 1.48
NEK3-202ENST00000550841 MTMR6Q9Y217 621 aa24.32■■□□□ 1.48
NEK3-202ENST00000550841 FAM205CA6NFA0 338 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 ADCY6O43306 1168 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 GGPS1O95749 300 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 UBA1P22314 1058 aaKnown RBP24.31■■□□□ 1.48
NEK3-202ENST00000550841 SP2Q02086 613 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 RILPL1Q5EBL4 403 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 ANKLE1Q8NAG6 615 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 ZNF577Q9BSK1 485 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 TSHZ2Q9NRE2 1034 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 TBC1D22BQ9NU19 505 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 RBM19Q9Y4C8 960 aaKnown RBP24.31■■□□□ 1.48
NEK3-202ENST00000550841 NFASCO94856 1347 aa24.31■■□□□ 1.48
NEK3-202ENST00000550841 TDP2O95551 362 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 PGK1P00558 417 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 C6orf222P0C671 652 aaPredicted RBP24.3■■□□□ 1.48
NEK3-202ENST00000550841 KCNA2P16389 499 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 ATP2B1P20020 1258 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 CPT1AP50416 773 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 MYSM1Q5VVJ2 828 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 METTL7BQ6UX53 244 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 PCSK9Q8NBP7 692 aaKnown RBP24.3■■□□□ 1.48
NEK3-202ENST00000550841 COPS5Q92905 334 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 SYNRGQ9UMZ2 1314 aa24.3■■□□□ 1.48
NEK3-202ENST00000550841 KIAA0100Q14667 2235 aaKnown RBP24.29■■□□□ 1.48
NEK3-202ENST00000550841 IPO5O00410 1097 aaKnown RBP24.29■■□□□ 1.48
NEK3-202ENST00000550841 TBX3O15119 743 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 MARCH6O60337 910 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 ATP9AO75110 1047 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 ADAMTS4O75173 837 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms