RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PSTPIP2Q9H939 334 aa10.79□□□□□ -0.68
YBX3-218ENST00000546298 SLC28A3Q9HAS3 691 aa10.79□□□□□ -0.68
YBX3-218ENST00000546298 HDAC6Q9UBN7 1215 aa10.79□□□□□ -0.68
YBX3-218ENST00000546298 GTF2IRD1Q9UHL9 959 aa10.79□□□□□ -0.68
YBX3-218ENST00000546298 LTBP2Q14767 1821 aa10.79□□□□□ -0.68
YBX3-218ENST00000546298 MCM3APO60318 1980 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 HAS3O00219 553 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 DLL1O00548 723 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 NOP56O00567 594 aaKnown RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 FIBPO43427 364 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 F2P00734 622 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 HMGB1P09429 215 aaKnown RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 SELPP16109 830 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 ATP2A2P16615 1042 aaKnown RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 UBA1P22314 1058 aaKnown RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 KIAA0753Q2KHM9 967 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 TSGA10IPQ3SY00 556 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 PCNX4Q63HM2 1172 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 USP17L6PQ6QN14 398 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 DHX32Q7L7V1 743 aaKnown RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 TEX2Q8IWB9 1127 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.78□□□□□ -0.68
YBX3-218ENST00000546298 PHOSPHO2Q8TCD6 241 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 INPP4AQ96PE3 977 aaPredicted RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 GAS2L1Q99501 681 aaPredicted RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 RBM28Q9NW13 759 aaKnown RBP10.78□□□□□ -0.68
YBX3-218ENST00000546298 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
YBX3-218ENST00000546298 SPATA31C2B4DYI2 1134 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 BAIAP3O94812 1187 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 ZNF286BP0CG31 522 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 RXRAP19793 462 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 PBX2P40425 430 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 SP2Q02086 613 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 RBL2Q08999 1139 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 PTK7Q13308 1070 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 HSDL1Q3SXM5 330 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 METTL7BQ6UX53 244 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 TMTC3Q6ZXV5 915 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 MICU3Q86XE3 530 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 GIMAP8Q8ND71 665 aaPredicted RBP10.77□□□□□ -0.69
YBX3-218ENST00000546298 PPP1R13LQ8WUF5 828 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
YBX3-218ENST00000546298 CDHR1Q96JP9 859 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 SLC9A7Q96T83 725 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 EHMT1Q9H9B1 1298 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 RTEL1Q9NZ71 1219 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 FRMPD4Q14CM0 1322 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 LAMA4Q16363 1823 aa10.77□□□□□ -0.69
YBX3-218ENST00000546298 SPDYE3A6NKU9 549 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 H3BRB1 525 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 MEIS2O14770 477 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 SORBS3O60504 671 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 GNAT1P11488 350 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 KCNJ6P48051 423 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 RCAN1P53805 252 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 MRPS9P82933 396 aaKnown RBP10.76□□□□□ -0.69
YBX3-218ENST00000546298 FGD1P98174 961 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 EXOSC10Q01780 885 aaKnown RBP10.76□□□□□ -0.69
YBX3-218ENST00000546298 LRRC8DQ7L1W4 858 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 CMTR1Q8N1G2 835 aaKnown RBP10.76□□□□□ -0.69
YBX3-218ENST00000546298 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 VWCEQ96DN2 955 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 C16orf70Q9BSU1 422 aa10.76□□□□□ -0.69
YBX3-218ENST00000546298 TUT1Q9H6E5 874 aaKnown RBP10.76□□□□□ -0.69
YBX3-218ENST00000546298 ZNF215Q9UL58 517 aaPredicted RBP10.76□□□□□ -0.69
YBX3-218ENST00000546298 CCDC196A0A1B0GTZ2 297 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 C17orf102A2RUQ5 167 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 hCG_1984214I3L0E3 225 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 MAFGO15525 162 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 ZBTB43O43298 467 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 EFCAB14O75071 495 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 LGALS2P05162 132 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 CKBP12277 381 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 RTN1Q16799 776 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 APOA5Q6Q788 366 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 HEATR3Q7Z4Q2 680 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 RAB11FIP4Q86YS3 637 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 ZNF713Q8N859 430 aaPredicted RBP10.75□□□□□ -0.69
YBX3-218ENST00000546298 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
YBX3-218ENST00000546298 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
YBX3-218ENST00000546298 GPRASP2Q96D09 838 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 CTAGE1Q96RT6 745 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 GLT8D2Q9H1C3 349 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 PRDM12Q9H4Q4 367 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
YBX3-218ENST00000546298 LRRC37A2A6NM11 1700 aa10.75□□□□□ -0.69
YBX3-218ENST00000546298 ABHD14A-ACY1A0A1B0GW23 586 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 FOSP01100 380 aaPredicted RBP10.74□□□□□ -0.69
YBX3-218ENST00000546298 RABGGTBP53611 331 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms